Camelina sativa (false flax): 104786127
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Entry
104786127 CDS
T05044
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104786127
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
90S particles
Other 90S particles
104786127
Pre-60S particles
Other pre-60S particles
104786127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
INTS7_N
Motif
Other DBs
NCBI-GeneID:
104786127
NCBI-ProteinID:
XP_010509763
LinkDB
All DBs
Position
5:complement(8127431..8138196)
Genome browser
AA seq
1283 aa
AA seq
DB search
MESLCVDIETRMSLTPSEPDLPVSEDFGEYMRARLSQSKRPDHEHLCAVIEELSKTLAED
NHGRTPVAYFAATCSSLNSILLDDGEPSLDVIQPHVVILSLVFPKVSAGILSRNGLALRL
VIDVLDLESATPECLISGLKCLVHLLTTVESIMGDEFSNCCSILQRFVIHSDGKVRKLAN
SGLRDVLLKSHGTQAWQSVSGAIAAMFQGRLDLAHHSEVGSSEGARGAKQVLYILTTLKE
CLALMSQQHIATLIEGFQVLMILRDPYITRPVIDSLNALCLNPTADVPVEALVEVLSLAA
GLFSGHETSADTMTFTARLLKVGITRTFSINRDLCVVKLPSVFNGLKDILASEHEEAIFA
ATDALKSLIFSCIDERLIREGVNGIRNSNLNARMSSPTVIEKLCATVESLLDYRYHAVWD
MAFQIVSAMFDKLGEDSAYFLRKTLEDLSDMQELPDEGFPYRKQLHVCVGSAVGAMGPET
FLSVVRLNLEASDLSEVKVWLFPILKQYTVGGRLSFFTETIFRMIETMSQKAQQLKLQGL
PGASRSVDSLVYSLWVLLPSFCNYPLDTVESFADLGRILCGVLQTQAETRGIICASLNIL
IQQNKEVVEGKEVSINDASPAVQRAVARYDSQHAAANLKVLRLCAPKLLDLLSRIYHESG
KDDGGSLQSAIGNLASIAEKKTVSKLLFKTLKELLEATQTAIAQDESSVSGMDVDNTRDK
NSSSNLRARLFDLLVSILPGLDAQAVDAIFSSLKPALQDPKGRIQKKAYKVLSIILKSSD
GFVSKNLEELLNLMHNLCHVSAKRHKLDCLYFLLAHASRTDDLKERKYIVSSFLPEVILA
LKEVNKKTRSRAYDVLVQIGHAYADEENGGDNEQLHGYFNMVVGCLAGEKPQMISAAVKG
VARLTYEFSDLIASAYNLLPSTFLLLQRKNKEITKANLGLLKVLVAKSPVEGLHANLRSM
VEGLLKWPEGTKNLFKAKVRLLLEMLIKKCGTEAVRSVMPEEHMKLLTNIRKIKERKEKK
YAAGSDISKSQHSKDTSSKVSRWNDTKIFSDFDDEYEDSDGDDMDAESHGRSKASSLLKS
KASALRSKKSRNQSHLEVDESDDEPLDLMDQHKTRLALRSSEFRKREAESDEEAEFDEEG
RLVIREGGRAKRKEISDADSDAKSSKGSRFSGNSSRKNQKRMKTSESGYSYTGKEYASKK
ASGDLRRKDKVEPYAYWPLDRKMMSRRPEQRAVAVRGMSSVVKMAKRMEGKSAAEALATT
KFKKFKRSGQKKSAGKKKNKADT
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atggaatcattatgtgttgacattgaaaccaggatgtccctcacaccctcagaacctgac
ctgcctgtttctgaagattttggggagtacatgcgcgctcgtttatcccagtcgaaacga
ccagaccatgaacatctatgtgccgtcatcgaggaattatcaaaaactctggctgaagat
aatcatggtcggacacctgttgcttactttgcggccacatgcagttcactgaacagcatc
ttgttggatgatggtgaaccgtctttggatgtcatccagccacatgttgttatcctttcc
cttgtgttccctaaagtctcagcaggaatactgagtaggaatgggttggctttgcgtctt
gtcattgacgttctggatctagaatcagccacgcctgagtgcttgatttcgggattgaag
tgtttggttcaccttctcacaactgttgagtccattatgggggacgaattctctaattgc
tgcagcatcttgcagagatttgtaatccattcagatggaaaggtaagaaagctagcaaac
tcgggtctccgtgatgtcctgctgaaatcccatggaacacaggcctggcaatcagttagt
ggagcaattgcagcaatgttccagggacgtttagaccttgcccatcactcggaagtgggt
tcttcagaaggagccaggggagcgaagcaagtgctttacattctgaccactctaaaagag
tgcttggccttgatgtctcagcagcacattgctactctgattgagggctttcaggtgctg
atgattctgcgcgatccatacattacaaggccagtgatagactctttaaatgcactttgt
ctcaatccaaccgccgacgttccagttgaggcgctggtcgaagtgctatcgcttgcggct
ggactgttctctggacatgaaacatctgctgataccatgacctttacagcacgtttgctg
aaagttgggattactaggactttttccataaacagagatctttgtgtggttaaacttcct
agtgtgttcaatggcctgaaagatattcttgcatctgaacacgaggaggcaatctttgca
gcaactgatgcattgaagagtttgatattttcatgcattgacgaaaggttgatcagagaa
ggtgtcaacggaatccggaattcaaacttgaatgcaaggatgtctagtccaacagtcatt
gaaaagctgtgtgcaacggttgagagcttgcttgattacagatatcatgcagtctgggat
atggcttttcaaattgtttcagcgatgttcgataaattaggtgaagattctgcatatttt
ctgaggaagaccctcgaggacttatcagatatgcaagaattacctgatgaaggctttcct
tatcggaagcagttgcatgtatgtgtaggatcagccgttggtgctatgggacctgaaaca
tttttgagcgttgtacgtttaaaccttgaagctagtgatctgtctgaggtaaaagtttgg
ctcttcccaatcttgaagcagtacacagttggaggacgcctgagtttcttcacagagact
atttttagaatgatagaaacaatgagccaaaaagctcaacagctcaagctacaaggtctt
cctggagcatcccggagtgtggattctctcgtatattcattatgggttttgttgccttca
ttctgtaattatcccttggatactgtggagagttttgccgatctgggtcgaatattatgt
ggagttcttcaaacacaggctgagacccgtggaattatatgcgccagtttgaatattctg
attcaacagaataaggaagttgttgaggggaaagaagtatctattaatgatgctagtcct
gctgtgcaacgagcagtagctcgttatgattcacagcatgcagcagccaatttgaaagtt
ttgcggttgtgtgctccgaaattattggatcttttgtcaaggatatatcatgaatctggc
aaagatgatggcggttctcttcagtctgcgataggcaacttggcttccatagcggagaaa
aagactgtttcgaagctacttttcaagactctgaaagagcttttagaggctacccaaact
gccattgcacaagatgaaagctctgttagtgggatggacgttgataacaccagagacaaa
aattcttcttccaacttaagggcaaggttgtttgatctgttagtttcaattttacctggt
ttggatgctcaagcagtagatgccatatttagttctctgaagcctgcattgcaggatcct
aagggccgaattcagaagaaagcgtacaaagttctttcaattatcttgaagagttctgat
ggatttgtttcaaagaatctcgaggagttgcttaacctgatgcacaatctatgccatgtc
tctgccaagcgccataaacttgattgtttatacttccttttagctcatgcatcaaggact
gatgatttaaaggagagaaaatacattgtttcttcttttctaccggaagttatacttgct
ttaaaggaggtaaataaaaaaacaagaagcagagcctatgacgtgcttgttcagattggt
catgcatatgcagatgaggaaaatggtggagacaatgagcaattgcatgggtacttcaat
atggtggttggttgcttagctggggaaaaacctcagatgattagtgctgctgtcaagggt
gtagctcgtttgacatatgagttctccgatctcatagctagtgcttacaatttgcttcct
tcaacatttcttctcctccagagaaaaaataaagaaattacaaaagcaaatttaggtttg
ttgaaggttttggtggctaaatcacccgttgaaggactacacgcaaacttaaggagcatg
gttgaaggcttattaaagtggccagaaggaacgaaaaaccttttcaaagcaaaggtgagg
cttctgttggagatgctcattaagaaatgtggcacggaagctgtcaggtctgtgatgcct
gaggaacatatgaaactcctgacaaacatccgaaagatcaaggaacgtaaagagaaaaaa
tatgcagctggttctgacataagtaaatcgcagcattcaaaagatacttcatcaaaggtt
agccggtggaatgataccaagatattttctgattttgatgatgaatacgaggacagcgat
ggagacgacatggatgcagagtctcatggccgtagcaaggcatcctctttattaaaatct
aaggcatccgctttgagatccaagaaaagtcggaaccagagtcatcttgaagtggatgag
tcagatgatgaaccgcttgacttaatggatcagcacaaaacgagattagctcttcggtca
agtgaatttcgcaaacgggaagctgagtcggatgaagaagcagagtttgatgaggaaggg
cggctagtcattcgtgaaggagggagggctaaaaggaaggaaatatctgatgcagattca
gatgccaaaagtagcaaaggtagccgtttctctggaaactcatccaggaagaaccaaaag
cggatgaagacatcagagtctggatactcctacacaggaaaagagtatgcaagcaaaaag
gcaagtggtgatcttaggaggaaagataaggttgaaccgtatgcatactggccacttgat
cgcaagatgatgagccgtagaccagagcagcgggcagttgcagtcagaggtatgtcaagt
gtggtcaagatggcaaagaggatggaagggaagagcgctgcagaagcacttgccactacc
aagttcaaaaaattcaagaggagtggtcaaaagaaatctgctgggaagaagaaaaacaaa
gctgatacttga
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