Camelina sativa (false flax): 104786254
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Entry
104786254 CDS
T05044
Name
(RefSeq) chaperonin CPN60-like 1, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104786254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104786254
03110 Chaperones and folding catalysts [BR:
csat03110
]
104786254
03029 Mitochondrial biogenesis [BR:
csat03029
]
104786254
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104786254
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
104786254
Messenger RNA biogenesis [BR:
csat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
104786254
Chaperones and folding catalysts [BR:
csat03110
]
Heat shock proteins
HSP60 / Chaperonin
104786254
Mitochondrial biogenesis [BR:
csat03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
104786254
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104786254
Exosomal proteins of other body fluids (saliva and urine)
104786254
Exosomal proteins of breast cancer cells
104786254
Exosomal proteins of colorectal cancer cells
104786254
Exosomal proteins of bladder cancer cells
104786254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Flavoprotein
Motif
Other DBs
NCBI-GeneID:
104786254
NCBI-ProteinID:
XP_010509916
LinkDB
All DBs
Position
5:8857632..8861395
Genome browser
AA seq
585 aa
AA seq
DB search
MYRLVTNVASKARIASKCTRQIGSRLNSTRNYAAKDIRFGVEARAMMLKGVEDLADAVKV
TMGPKGRNVIIEQSWGAPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDVAGDGT
TCATVLTRAIFTEGCKSVAAGMNAMDLRRGIKLAVDTVVTNLQSRARMISTSEEIAQVGT
ISANGDREIGELIAKAMETVGKEGVITIQDGKTLFNELEVVEGMKIDRGYISPYFITNPK
TQKCELEDPLILIHEKKISNINAMVKVLELALKKQRPLVIVAEDVESDALATLILNKLRA
GIKVCAVKAPGFGENRKANLHDLAALTGAQVITEELGMNLDNIDLSMFGNCKKITVSKDD
TVFLDGAGDKTAIGERCEQIRSMVEASTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
SEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELEKLSTANFDQKIGVQIIQNALKT
PVYTIASNAGVEGAVIVGKLLEQDNPDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAA
SVSSLLTTTEAVVTEIPTKEEASPGMGGGGMGGMGGMGGMGGMGF
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtatcggctagtcaccaacgttgcttccaaagctaggattgccagcaagtgtacaaga
cagattggaagcaggctcaattccactaggaattatgcagcaaaagacataaggtttggt
gttgaagctcgggctatgatgcttaagggtgtcgaggatcttgctgatgcagttaaagtc
actatgggacccaagggtcgtaatgtcatcattgaacaaagctggggtgcaccgaaggtg
acaaaagatggtgtgactgttgccaagagcattgagttcaaggacagagttaagaacgtt
ggtgccagtcttgtcaaacaggttgctaatgccacgaatgacgtagctggtgatggaaca
acatgtgctacagtccttactcgagctatcttcacggaaggttgtaaatcagttgccgct
ggaatgaatgcgatggacctaagacgtggtatcaaactggcagttgatactgttgtgacg
aacttgcagagtcgagcacgcatgattagcacttctgaagaaatcgcccaagttggaaca
atatcagctaacggagatagagaaattggtgaactgattgccaaggctatggaaactgtc
ggcaaagagggagtgatcacaattcaagatggcaagacattgtttaatgagctggaagtt
gttgagggtatgaagattgacagaggatacatctccccgtacttcataacaaacccgaaa
acccaaaaatgtgaactagaagatcctctcattcttatccacgagaagaaaatttccaat
ataaacgctatggtgaaagtcttagaactggccctcaagaagcaaaggccgctagtgatt
gttgctgaggatgtggagagtgatgctcttgccaccctaattctgaataaacttcgtgct
ggaatcaaggtctgtgctgtgaaggcccctggttttggagagaaccgaaaggccaattta
cacgatctagctgccctcactggagcccaggtaataacagaggagttaggtatgaatctc
gacaacattgacctcagtatgttcggaaactgcaagaagattactgtatccaaagatgat
actgtttttctcgatggggctggtgacaagacagcaattggggaacgatgtgagcagatt
cgatccatggttgaagcgagcacgtctgattatgacaaggagaagttgcaagaaaggttg
gctaagctttcgggtggtgttgctgtactaaagattggtggagcgagtgaggcagaagtt
agcgagaagaaagatagagtaacggatgctctaaatgccactaaagcagccgtagaagag
ggtattgttccaggtggtggtgttgctcttttgtatgcctcgaaagaacttgagaagctt
tcgacagctaactttgatcagaaaattggtgttcaaatcattcaaaacgctctcaagaca
cctgtttacacaattgcttccaatgctggagtcgagggtgcagttatcgtaggcaagctt
ttggagcaagataaccctgacctcggttatgatgctgccaaaggagaatatgttgacatg
gtaaagtctggtattatcgatcctttgaaagtgatcagaacggcattggttgatgctgca
agtgtctcgtctttgttgacaacaacggaagcagttgtgactgagattccaacgaaagag
gaggcgtctccgggtatgggtggcggcggcatgggtggcatgggcggtatgggaggaatg
ggaggaatgggtttctga
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