Camelina sativa (false flax): 104786261
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Entry
104786261 CDS
T05044
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Module
csat_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104786261
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
104786261
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
104786261
NCBI-ProteinID:
XP_010509923
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Position
5:complement(8960600..8962438)
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AA seq
399 aa
AA seq
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MASRFLTLFVLSLFFVLAASMNQEKVFDVRNYGAYADGKRDNSLAFTKAWNDACQWSSGR
STVYIAPGVFYLRQVTFAGPCKNSITFLVKGTLLAPQNPNFINQEEWILFEYVDSLTVTG
GGLLDGQGSYSWPLNDCNKNSNCRPLAMNIGFAFVTHSRIDGIRSINSKMGHFNLYGVSD
FNISGVTITAPGDSPNTDGIKIGRSSNMHIRDVTIGTGDDCIAILDGTTNLDISRVRCGP
GHGISVGSLGRYKEEKNVQGLTVRDSVFIGTTDGLRIKTWAKSVSEISVSNFLYENIQMI
NVGNPIIIDQQYCPNGLCDSSGKYASHVQIKNVKYNQIWGTSTTKEALNMQCSRAFPCQG
VELSNINLKYVGSDGLVTALCQNVGGSIRGTIVPGNCLI
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctaggtttctgactctttttgtgttgtctctcttcttcgtcctcgccgcttcg
atgaaccaagaaaaagtctttgacgtcagaaactacggtgcttacgccgacggcaaaaga
gacaatagtttggcgtttacaaaggcgtggaacgacgcttgccagtggagtagcgggaga
tcaacggtctatattgctcccggagtattctatctccgtcaagtaacgttcgctggtcct
tgcaaaaactctattacttttttggtcaaaggaacattattagctcctcagaatcctaac
ttcatcaaccaagaagaatggatacttttcgagtacgtcgatagcctcaccgtcactggc
ggcgggttacttgacggccaagggtcttattcttggccactcaatgattgtaacaagaac
agtaattgtcgtccactagctatgaacattggttttgccttcgttactcactcgaggatt
gacggcataagatccatcaacagcaaaatgggacatttcaacctatacggtgtcagtgat
tttaacatttcaggcgttaccatcactgctcctggagatagccctaacaccgacggaatc
aagatcgggagatctagcaatatgcatatccgcgacgtcactattggaaccggtgacgat
tgtatcgcaatccttgatggaaccaccaatttggatatctctcgtgtcaggtgcggacca
gggcacgggattagtgttgggagcctcgggagatacaaagaggagaaaaacgtgcagggc
ttaaccgtcagagactcggttttcatcggcacaaccgacggtttacgcatcaaaacatgg
gctaagtcggtctcggagatctcggtttcgaatttcttgtacgagaatatccaaatgatc
aatgttggaaaccctatcatcattgatcagcagtattgtccaaacggactatgcgacagt
tctggaaagtatgcgtctcatgttcagatcaaaaatgtgaagtacaaccaaatttgggga
acttcgacgaccaaagaggctttgaatatgcaatgtagtagagcgtttccttgtcaaggc
gttgagctctcaaacatcaacttgaagtacgttggaagcgacggtctagtcacggctttg
tgtcagaacgttggtggttccattcgtggcacaattgtaccgggaaattgcctgatttga
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