Camelina sativa (false flax): 104786389
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Entry
104786389 CDS
T05044
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104786389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104786389
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104786389
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104786389
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
104786389
NCBI-ProteinID:
XP_010510103
UniProt:
A0ABM0Z3Z6
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All DBs
Position
5:10031445..10032733
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AA seq
253 aa
AA seq
DB search
MSLFYKEDKIQIREVCSDNLESEMSLIRDAVDDFPFVGMVCRPLAVGDFPGIVLGNFNNL
AEYNYETLKTNVNNVETLQLGLTLSNENGDLPTCGTGKYCIWQFNIRDAVAENNQTGIDP
EEFVKLMMSPGTVLNENVHLVTFHGGYDVGYLLKLLTCQNLPETQSGFFQMISLYFPRVY
DVKHLMKFSNGVYGDLNYLAELLDVERVWIDHQVGSDCLLTSCTFRKLQEVFFTGSLDKY
SGIFFGLGVVTNG
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgttttacaaggaagataagattcaaatccgtgaggtgtgctccgacaatcta
gaatcagagatgtctctgatccgagacgccgtggatgattttccgttcgtcggaatggtg
tgcagaccactagccgtcggcgatttcccaggaatcgtgttaggtaatttcaataaccta
gccgagtacaactacgaaaccctaaaaacgaacgtcaacaatgtcgaaacgcttcagctc
ggactcactctctccaacgagaatggagacctcccaacttgtgggactggcaaatactgt
atctggcagttcaatatccgcgacgccgtcgctgaaaacaaccaaaccggtatagatccc
gaagaattcgttaagcttatgatgtctccagggactgtgttgaacgaaaacgtccacttg
gttacattccacggcggatacgatgtcgggtacttgctcaagctcctcacttgtcagaat
cttccagagacgcaatcggggttctttcagatgatcagtttgtatttccctagagtttac
gacgtcaaacacttgatgaagttcagcaacggtgtttatggagatctcaactatttggct
gagctgctcgatgtcgagagagtttggattgatcaccaggtcggatcagactgcttgttg
acgtcgtgtacattcaggaagctgcaggaggttttcttcactggttctttggataaatat
tctggtattttttttggattaggtgttgtgaccaatggttag
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