Camelina sativa (false flax): 104786401
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Entry
104786401 CDS
T05044
Name
(RefSeq) DNA topoisomerase 3-beta isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03440
Homologous recombination
csat03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104786401
03460 Fanconi anemia pathway
104786401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csat03032
]
104786401
03400 DNA repair and recombination proteins [BR:
csat03400
]
104786401
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
104786401
DNA replication proteins [BR:
csat03032
]
Eukaryotic type
DNA Topoisomerases
104786401
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
104786401
FA (Fanconi anemia) pathway
104786401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
104786401
NCBI-ProteinID:
XP_010510115
UniProt:
A0ABM0Z407
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Position
5:10107967..10118112
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AA seq
865 aa
AA seq
DB search
MAHLPRVLMVAEKPSIALSIASVLSRGQMSTRRGSTEVHEFDGIFRGFKAHFRVTSVIGH
VFSVDFPEKYQNWQTVDPQDLFDAPVAKKESNPKAHICRHLSNEARGCSYMVLWLDCDRE
GENICFEVIESTGFDMKDSKRKVYRARFSSVTEKDISKAMDNLVEPNRDEALAVDARQEI
DLKVGVAFSRFQTSYFQGKYQNLDCRVISYGPCQTPTLGFCVQRYMHINTFNPEKFWALR
PYIMKDGYELQLEWERRRLFDLEAATVFQKLVVEGRTAKVMDVSEKQEVKGRPAGLNTVN
LLKVASSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPSSFDFADTLRAQISNSMWGG
YVQRLLSDGFQKPKSGTDAGDHPPITPMRAATEDMVGGDAWRLYQYVCQHFIGTVSPNCK
YIRTKVELSIGGETFHCTGQRVTEKGFTAIMPRSAVDEKKLPSFLKGERIEVLRVELYEG
NTAPPDFLTESELISLMEKHGIGTDASIPVHINNIGERNYVQVQSGRKLVPTALGITLIR
GYQCIDPDLCLPDIRSFIEQQITLVAKGQADHSYVVQHVIQQFRRKFSYFVQQIEHMDAL
FEAQFSPLAGSGRPLSKCGKCLRYMKHITAVPPRLFCGTCEEVYYLPQKGTVKLYKELTC
PLDNFELVIYSVPGAEGKSFPLCPYCYNSPPFEGIDTLFGASKTPNGPAKSKTGSGMPCS
LCPHPTCQHSVRNQGVCACPECEGTLVLDPVSFPKWKLNCNLCSCIVFLPEGAHRIATTS
NRCPECDSAIIEIDFNKKTTPLENGATLHQGCVLCDELLLSLVEVKHGRSFVRRGGRGRG
RGRGRGRGGRRGSKAVDPKMSFRDF
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggctcatctccccagagttcttatggtggcggagaagcccagcatcgccctctccata
gcttcagttctctctcgtggccagatgtctacaaggagaggcagtacagaggtgcatgaa
tttgatggcatctttcgaggcttcaaagcacattttagagttacatctgttatcggacat
gttttcagtgtagatttcccagaaaaatatcagaattggcaaacagttgatccacaagat
ctttttgacgctccagttgctaaaaaagagtctaacccaaaggctcatatttgtaggcat
ttaagtaatgaagctcgtggttgcagttatatggtattgtggttggattgcgatcgtgaa
ggggagaatatatgttttgaagttatcgagtctactggctttgacatgaaagatagtaag
agaaaggtttatcgggcacggttttcttctgtgactgagaaagatatatcaaaggccatg
gacaaccttgttgaaccaaacagagatgaggcactggcagtagatgctcgccaagagata
gatctaaaagttggtgtagcattctcgcgatttcaaacaagttatttccaaggcaaatat
cagaatctcgactgcagagttatctcttatgggccatgccagactcctactcttgggttt
tgtgtgcaacggtacatgcatattaatactttcaacccagaaaagttttgggctctgcga
ccttatataatgaaggatggttatgagcttcaactagagtgggagagacgtagattgttc
gacctggaagctgctactgtgtttcaaaagttggtcgtggaaggcagaactgcaaaagta
atggacgtatcagaaaagcaggaagttaaaggtcgtccagctggtcttaacacagtgaat
ttgctaaaggttgcttcaagtgcactagggtttgggcctcagacggctatgcatcttgcc
gagcgattgtatactcaaggcttcatcagctatccgcgaacagaaagcacagcctatcct
tcttcattcgacttcgcagacacactcagagcacaaattagtaattcaatgtggggtggt
tatgtacagagactgctctcagatggctttcaaaagccaaagtcaggaaccgatgctgga
gaccatcctcctatcaccccgatgcgagcagcaaccgaggacatggttggaggagatgct
tggcgactctatcagtatgtctgtcaacattttattggcactgtctcacctaactgcaaa
tacataaggactaaagtggaattgtcaattggtggagaaactttccattgtacggggcag
cgagtgacagaaaaggggtttacggctataatgccacggtctgcagtggatgagaaaaaa
ctcccttctttcctcaaaggagagaggattgaagttttacgagtggagctgtacgaggga
aacactgcgcctccggacttccttactgagagtgagctgatatctctaatggagaagcat
ggtataggcacagatgcatcaatacctgtgcatataaacaacattggtgaacgtaattat
gttcaggtccaatctggcaggaaattggttccaacggcattaggaatcacgctaataaga
ggctatcagtgtattgatccagacctttgcttaccagacatccgtagctttatcgagcaa
caaatcactcttgttgccaagggccaagctgatcattcgtatgtagtgcaacatgtgatc
cagcaatttaggcgtaaattcagttattttgttcaacagatcgaacacatggatgccctg
tttgaagcacagttctctcctctggctggctctggtcgccctttaagcaaatgtggaaaa
tgcttgcgttacatgaaacacatcacagcagtcccaccacgtctcttctgcggcacatgc
gaagaagtttattatcttcctcaaaagggcacagtcaagctatacaaagaactcacatgt
cctttagacaactttgagctcgtgatctattcagttccaggagccgaggggaaatcattt
ccactatgcccatactgctacaactctcctccattcgaaggcatagacacactctttgga
gcatctaagacgcccaatggtcctgccaaatcgaaaaccggttcaggcatgccatgttca
ctctgtcctcatcccacatgccaacactctgtcagaaaccaaggagtctgcgcttgtcca
gagtgcgaaggcacgctcgtcttggaccccgtgagcttccccaagtggaaactcaactgc
aacttgtgtagttgcatcgtttttcttccggagggtgctcatcgcatagccaccactagt
aaccgctgtcccgagtgcgattcagcaatcatagagatcgatttcaacaagaaaactact
cctctggagaacggagccactctgcatcaaggatgtgttctatgtgatgagttgcttctc
tcacttgtagaagtgaaacatgggaggtcctttgtgaggcgaggaggaaggggaagggga
cgaggaagaggccgaggcagaggagggagaagaggctcaaaagctgtcgacccaaaaatg
agtttcagagacttctaa
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