Camelina sativa (false flax): 104786731
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Entry
104786731 CDS
T05044
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex isoform X1
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
csat
Camelina sativa (false flax)
Pathway
csat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104786731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104786731
03036 Chromosome and associated proteins [BR:
csat03036
]
104786731
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
104786731
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
104786731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
eIF2A
Beta-prop_WDR75_1st
Ge1_WD40
Beta-prop_EIPR1
RMC1_N
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
MIOS_WD40
CFAP43_N
Beta-prop_VPS8
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
104786731
NCBI-ProteinID:
XP_010510479
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Position
5:complement(12968340..12970373)
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AA seq
452 aa
AA seq
DB search
MDTGGSSYLKAMARCPIQRSFLPRDTSKENLDRFIPNRSAMDFDFAYWQLMERPPNLNDD
QQATKKVSSPSREAYKKRLAEAMNLNRTRILSFRNRPQTPTPPVATQTLPVGIYQQQQRK
PPRHIPKTFERMLDVHDLADDFYLNLLDWGTDNVLAIALYHTVYLWDASKGSTTELVTVD
EDTGPVTSINWAADGRYLAVGLNSSQVQIWDCADCRRLRTLECGHASRVGSLAWNDLILT
TGGMDGKIINNDVRVRSHVVNTYRGHTLQVCGLKWSGSGQHLASGGNDNVVNIWDRSTST
QRLHRLVEHTSAVKALAWCPFQTNLLATGGGEGDGSIKFWNTRTGACLNTVETGSQVSSL
LWSNKERELLSSHGFTQNQLTLWKYPSMVKMAELNGHTSRVLYTALSPNGCTVASAAADE
RLMFWNVFGDPENAKKAAPKLPEPFSHVNRIR
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggatacaggaggttcttcctacttgaaggcaatggctcgatgcccaattcagcgatcc
tttctccctagagatacctccaaagaaaaccttgacagattcattccgaatagatcagcc
atggattttgactttgcctactggcagctaatggaaagaccaccaaacctgaacgatgat
cagcaggcaacaaagaaggtaagctcaccatcgagagaagcctataagaaacgtttggct
gaagccatgaatctcaatcgaactcgtatcctttcctttaggaacagacctcaaactcca
actcctccagtggcaactcaaactcttccagtgggaatttaccaacagcagcagcgtaag
ccgcctagacacatccctaagactttcgagagaatgttggatgttcatgacttggccgat
gacttttatctcaacttacttgactggggcactgataacgttttagccattgcattgtat
catactgtttatctctgggatgcttctaagggttctactactgagcttgtcactgttgat
gaagatacgggacctgtcacaagtatcaactgggcagcagatggtcgttatcttgctgtt
gggcttaacagctctcaagtccagatttgggattgtgctgattgtcgtagactgagaacg
ttggagtgtggtcacgcgtctagagtaggatcgttggcatggaacgatcttatcttgaca
acgggaggaatggatgggaagatcatcaacaacgacgtacgggttagatcacacgttgtg
aatacgtacaggggtcacactttacaagtttgtgggttgaagtggtcaggatctggacag
catttagcaagtggtggcaacgacaatgtggttaatatatgggaccgttctactagtact
cagcggctgcacaggcttgtagagcacacatctgcagttaaagctcttgcttggtgccct
ttccaaacgaatttacttgcaactggtggcggtgaaggagatgggagtataaagttctgg
aatactaggacaggagcttgcttgaacacggtagaaactggctctcaagtttcttctctg
ttatggagcaacaaggaaagagagttgcttagctcacatgggtttactcagaaccagctt
acactttggaagtacccatctatggtgaaaatggctgagctcaatggtcacacatcacgt
gttctatatacggccctgagtccgaatggttgtactgtagcttctgcagcagcagacgag
agactgatgttttggaatgtatttggagatccagagaatgccaaaaaagctgctccaaaa
ttacctgagccattttctcatgtgaaccgtattcgctga
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