Camelina sativa (false flax): 104786817
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Entry
104786817 CDS
T05044
Name
(RefSeq) U-box domain-containing protein 12
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104786817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104786817
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104786817
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
U-box type E3
104786817
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
PUB10_N
ARM_PUB
U-box
ARM_ARMC5
zf-RING_UBOX
MLKL_N
Neurochondrin
zf-Nse
PUB2_N
zf-C3HC4_4
Arm_2
MCAfunc
zf-C3HC4_2
KAP
TPD52
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
104786817
NCBI-ProteinID:
XP_010510574
UniProt:
A0ABM0Z556
LinkDB
All DBs
Position
5:13660947..13663696
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AA seq
654 aa
AA seq
DB search
MAKSEKHKLAQTLIDSVNEIASISDHRAPMKKHCSNLSRRLKLLLPMLEEIRDNCKESTI
PDQVVTALFSLKDSLVPAKDLVAFVGQVSKIYLVLERDQVMVKFQKVTALLEQALSGIPY
ENLEISDELKEQVELVLIQLRREIGRGGDAYDDELYRDVMSLYNDTGSVTDFDMLRRVAL
KLQLMTITDLTQESLALLDMVSSSGGDPGDSFEKMSMVLKRIKDFVQTDNPNLDDAPMRL
KSPLPKAQDGDLNLPIPPEDFRCPISLELMNDPVIVSSGQTYERECIKKWLEGGHLTCPK
TQETLTSDTVTPNYALRSLIAQWCESNGIEPPKRPNNSQPSSKASSSSSTSDDEHNKIEE
LLTKLTSQHPEDQRSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTVSSDSRIQEHAV
TSILNLSICQENKERIVYSCGAIPGIVHVLQKGSMEARENAAATLFSLSVIDENKVAIGT
AGAIPPLVTLLSEGSRRGKKDAATALFNLCIFQGNKGKAVRAGLVPVIMRLLTETTSGMV
DEALAILAIISSHPDGKMVAGAADAVHVMVDFIRSGSPRNKENAAAVLVHLCSWDQQHLI
EAQKLGIMSLLIEMAENGTDREKRKAAQLLNRFSRFNDQQKQSGLGVEDQISLI
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatcagagaaacacaagttagcccaaaccttaatcgattcagtaaacgaaatc
gcttcgatttcagatcaccgtgcaccgatgaagaaacactgtagcaatctctcccgtcga
ttgaagcttcttcttcctatgctagaagagatcagagacaactgtaaagaatcaacgatc
cctgaccaagtggttacggctttgttttctcttaaggactcgcttgttcctgctaaggat
ttggttgctttcgttggccaagttagcaaaatttacctggtgttggagagagaccaagtg
atggttaagtttcagaaagtgacggctctattggaacaagctttaagtggaatcccatat
gagaatctcgaaatttcagatgagcttaaagaacaggttgagcttgttttaattcagtta
agaagagaaataggaagaggcggggatgcgtatgatgatgagttatatagggatgttatg
tctctttataatgatacaggcagtgtaacagattttgatatgctcaggagagtggcgttg
aagcttcagttgatgactataactgaccttacgcaagagtcattggctttacttgatatg
gtcagttcgagtggtggagatccaggtgatagctttgagaagatgtcgatggttctcaag
agaattaaggactttgtgcaaaccgataatcctaacttggatgatgctcccatgagactg
aaatcaccgcttccgaaggcacaagatggtgatctaaatttgccgataccgcctgaagat
ttccgttgtccgatttctctagaattgatgaatgatccagttattgtttcttcagggcag
acgtatgaacgtgagtgcattaagaagtggcttgaaggagggcatttgacgtgtccaaag
acgcaagaaacgctgacaagtgataccgtcacaccaaactatgctttaagaagccttata
gctcaatggtgtgaatccaatggcatcgaacctccaaagcgtcccaacaattctcaaccg
agtagtaaagcctcatcttcctcctcaacctctgatgatgaacataacaagattgaagaa
ctcctaactaagctcacatcgcaacaccctgaagaccaaagatccgctgctggagaaatc
cgtcttctagcgaaacagaacaaccataatcgagtcgccattgctgcatcaggcgcgatc
cctcttctggtgaatctcctcacggtatccagtgactcccggattcaagaacacgctgtg
acatcgattcttaacctctcgatatgccaagagaacaaagagagaattgtttattcatgt
ggagcgattccaggtattgttcatgtgctccagaaaggaagcatggaagctagagaaaac
gcagcagccacacttttcagcctttcggttatagacgagaacaaagtggcaataggcacc
gcaggagcgatcccacctcttgtgaccttgctgagcgaaggatcacgaagaggcaaaaaa
gatgcggcgactgctctgttcaatctctgcatatttcaagggaacaaaggaaaagctgtg
agagccggtttagttcccgtgataatgcgtttgctaacagagaccacaagcggaatggtt
gatgaagcacttgctatattagccataatatcgagtcacccggatgggaaaatggtagct
ggagccgctgatgcggttcatgttatggtagattttataaggagcgggtcaccacggaac
aaagagaacgcagctgcggtattagtgcacttgtgttcatgggatcagcagcatttgatt
gaagctcagaaattagggattatgagtcttttaatagaaatggctgagaatggtactgac
agagaaaaacgcaaagcggcacagttacttaaccgctttagccgttttaacgaccagcag
aaacagtctggtttaggtgtcgaagatcaaatctctctaatctga
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