Camelina sativa (false flax): 104786933
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Entry
104786933 CDS
T05044
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104786933
Membrane trafficking [BR:
csat04131
]
Protein recycling
Others
EARP complex
104786933
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Ortholog
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GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
TetR_C_30
Motif
Other DBs
NCBI-GeneID:
104786933
NCBI-ProteinID:
XP_010510714
UniProt:
A0ABM0Z5I7
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Position
5
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AA seq
1134 aa
AA seq
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MQPNLFPFGTVLSNPFLFNGGDLTELGSGAGFESSRVFFLLPFFLSSQGGSGGMDLSKVG
EKFLSSVKSATSLGLLPSPSFSDRPEIPARAAAAAAVARALAGLPSDQGLSISSTATELS
SIYGNRPLPQQVEELEEGFYEEDFDSVMHILENVPDDQSELAYFEKQATLRLVQLDRVAE
DLSHHVMEHHEVMVKGMNLVRELEKDLKIANVICKNGRRNLTSSMNEASRDLIVHNHSKK
KQALLDMLPILTDLRHARVMRSTLEDLVEEGNYCKAFQVLSEYLQLLDSLSEFSAAQEMT
RGVEVWLGRTLHKLDSLLLGVCQEFKEDSYVMVLDAYALIGDVSGLAEKIQSFFMQEVIS
ETHSVLKTIVGEDNSAATQYSRLTYSDLCLQTPESKFRQCLLRTLAVLFQLIYSYHEIMS
FTPEKKVESLISPSSATTQMVDSVTRSACDPQDGGLSSAMSSGSIPPCTISAEESDGSGT
SSSVQQVLQASDSAIDEPRDSGDAVSCGESPWYHLRKESAAFVSETLQRGRRNLWQLTTS
RVSVLLSSPGASSTSIHQFLKNYEDLSIFILAGEAFCGFEVVDFREKLKGVCENYFTAFH
RQSMHALKMVLEKETWTKLSPDTVQTINFAGLVGDGAPLIISSRSATGSSRFPHSNKSNN
SVDPSGNRSGFSYWLKSGNPFSAKLTLYREDQDYSSVNGAISRDDEGNDSIHDDVVNPKI
RDKKRVNGGSPVSEDENEDLLADFIDEDSQLPRRSFTRSQSRTSSSHLSTNDDLTAQTGS
SLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVFQVFGQENTNSGGKGVADSF
NHRLKSSLSRISQECEQWIKPHISSSPSSSLAFPNTVHSLADVTPANPLNTSGHISGVSF
SLKERCAAVDTVSLVARILHKSKAHLQSMLMSRTGSLVEDFFGQLVDSVPHLTEHLHRTT
ARILLHVNGYVDRIANSKWEVKELGMEHNGYVDLMLGEFKHYKTRLAHGGIPPEVQNRLL
EYGVEIFAEILVEGLSRIKRCTNEGRALMLLDFQVLINGLQHFVPTNVKPKLQIVETFIK
AYYLPETEYVHWARARPEYTKAQVVGLVNLVATMKGWKRKTRLEVIEKIESASA
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctaatcttttcccattcggcactgttttgagtaatccattcctcttcaatggc
ggagatctaaccgaacttggttctggtgctggattcgagagctctagggttttcttctta
ctccctttctttttatcatcccaaggcggcagtggtgggatggatttgtccaaagttggt
gaaaagttcctcagctctgttaaatccgctacttctcttggtctcttaccttctccttct
ttctccgatcgtcctgagattcctgcacgtgctgcagctgctgctgcggttgctcgtgct
ttggctggactaccttctgatcaagggttgagtatatcttctactgctactgagcttagt
tcaatttatgggaatagacctcttcctcagcaagttgaagagcttgaagaagggttttat
gaagaggattttgattctgtaatgcatattttggagaatgtgccggatgatcaaagtgag
ttggcttattttgagaaacaggccaccttgaggttggtacagctggatagagtggcagaa
gatctgtctcaccatgttatggagcatcatgaagtaatggtgaaggggatgaatttggtt
agagaacttgaaaaagatttgaagattgcaaatgtcatctgcaagaatggaagacgaaat
ttgacttcttctatgaatgaggcctccagagatcttattgtacacaatcattccaaaaag
aaacaagctcttctggatatgcttcctattctaaccgatctccgccatgcaagggtaatg
cggtcaactcttgaagaccttgttgaagaaggaaactattgcaaggcgtttcaagttcta
tcggagtatttgcagctgcttgatagtctatctgaattctcagcagcccaagagatgacc
cgtggtgttgaggtttggttaggaagaactctccataagctggattcactattgttgggc
gtttgccaggagttcaaagaagatagttatgtaatggtccttgacgcttatgcactgatc
ggtgatgtctctggtcttgccgaaaaaatacaaagcttctttatgcaagaagttatctca
gaaacccactcagtgctaaagaccattgttggggaggataacagtgctgccacccaatat
agtagacttacctacagcgatctatgccttcagacaccagaatccaagtttaggcaatgt
cttttgagaacactagctgtgctgtttcagttaatatattcataccatgagataatgagt
ttcacgccagaaaagaaggtagaaagtttgatttcaccaagttctgcaacaactcaaatg
gttgattcagtaactagaagtgcatgcgacccacaggatgggggcctctcatcagccatg
agttctggaagtatacctccttgtacaatttctgctgaagagtctgatggaagtggaaca
tccagttccgtgcagcaggtgctgcaggcgtctgatagtgcaatagatgagcctagagat
tctggagatgcagtatcatgtggcgagtcgccatggtaccatctacgaaaagaaagtgca
gcttttgtttcagaaactcttcagagaggacgaagaaatctttggcaacttacaacgagc
cgtgtctcagttttgctctcttccccaggtgcttcatcaacaagtatacatcagttccta
aaaaattatgaagacctgagcatctttatccttgctggggaagcattctgtggatttgaa
gttgttgattttagggagaagctaaagggtgtatgtgaaaattatttcactgcgtttcat
agacaaagcatgcatgcgcttaaaatggttctggagaaggagacatggacaaaattgtct
cctgatactgtgcaaactattaattttgctggtcttgtgggggatggggctcccctaatt
atttcttcccgcagtgccactggttcttccagattccctcactcgaataagtcaaataac
tcagttgatccaagtggtaacaggagtggattttcttattggctgaaaagtggaaacccc
ttctcagcaaagttaactctctatagagaagatcaagactactcctcagttaatggagct
atctctcgagatgatgaagggaatgatagtattcacgatgatgttgtgaatcccaagata
agagataaaaaacgcgttaacggaggcagtcctgtttcagaagatgaaaacgaagacctt
cttgctgactttattgatgaggatagtcagcttccaagacgaagttttacacgtagtcaa
tcaaggacttcatcttcacatctcagtactaatgatgatttgacagctcaaacaggatcg
tccctttgtcttctaagatcaatggataagtacgcgaggcttatgcagaaactagaaatt
gttaacgttgaattctttaagggaatatgccaattgtttggggtctttttctattttgta
tttcaagtatttggtcaagaaaatactaattcaggtggaaaaggagtcgctgactctttc
aatcatcgtttgaaaagcagcttatcccggatatcacaagagtgtgagcaatggataaaa
cctcacatttcatcatcaccttcttcttcacttgcctttcccaacaccgttcatagtctt
gcggacgtgactccagcaaatcccttaaatacttctggtcacatatcaggcgtatctttt
agtctcaaggaaagatgtgctgcagtggacactgtttctcttgtggctcggatattacat
aaatcaaaggctcatctccaatcaatgcttatgtcaagaactggctctctggttgaagac
ttctttggtcaactggttgattccgtccctcatctgacagagcacttacataggacaact
gcgaggatactgctgcatgttaatggatatgtcgaccggatagctaattctaaatgggaa
gtcaaggagcttggaatggagcataatgggtatgttgatttaatgctcggggaattcaaa
cactacaaaacaaggcttgctcatggaggcattccaccggaggtccaaaaccgcctactg
gaatatggagttgaaatatttgcggagattctggttgaaggtttatcacgaataaaaaga
tgtactaatgaaggacgtgctctcatgttattagattttcaggttctaataaacgggcta
cagcactttgtgcctacaaatgtgaagccgaagttacaaatagtcgaaacatttatcaag
gcatactatctgccagagacggaatatgttcactgggcaagggctcgtccggaatataca
aaagcacaagtcgttggactggtgaatttagtagccaccatgaaaggttggaagaggaaa
acgcggctggaagttatcgagaagatcgaatcagcttctgcgtag
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