Camelina sativa (false flax): 104787029
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Entry
104787029 CDS
T05044
Name
(RefSeq) protein argonaute 4
KO
K11593
eukaryotic translation initiation factor 2C
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104787029
03036 Chromosome and associated proteins [BR:
csat03036
]
104787029
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
104787029
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
104787029
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
104787029
microRNA pathway
RISC loading complex
104787029
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
104787029
NCBI-ProteinID:
XP_010510823
LinkDB
All DBs
Position
5:15992698..16001289
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AA seq
923 aa
AA seq
DB search
MDSTNGNGADLESANGANGSGVTDALPPPPPVIPPNVEPVRVKTELAEKKNLRVPMARKG
FGTRGQKIPLLTNHFRVDVANLQGHFFHYSVALFYDDGRPVEAKGVGRKILDKVHETYHS
DLDGKEFAYDGEKTLFTYGALPSNKMDFSVVLEEVSVARTNGNGSPNGNESPSDGDRKRL
RRPNRSKNFKVEISYAAKIPLQALANAMRGQESENSQEAIRVLDIILRQHAARQGCLLVR
QSFFHNDPNNCEPVGGNILGCRGFHSSFRTTQGGMSLNMDVTTTMIIKPGPVVDFLIANQ
NARDPYSVDWSKAKRTLKNLRIKVSPSNQEFRITGLSEKNCSEQTFELKKRNPDGNGEFE
TTEVTVADYFRETRHIELQYSADLPCINVGKPKRPTYIPLELCALIPLQRYTKALNTFQR
SALVEKSRQKPQERMAVLSKALKVSNYDAEPLLRSCGISISSNFTQVEGRVLPAPKLKMG
CGSETFPRNGRWNFNNKQFVEPTKIERWVVVNFSARCNVRQVVDDLIKIGGSKGIDIAHP
FQVFEEGNQFRRAPPLNRVENMFKDIQSKLPGVPQFILCVLPEKKNCDLYGPWKKKNLTE
FGIVTQCMAPTRQPNDQYLTNLLLKINAKLGGLNSMLSVERTPAFTVISKVPTIILGMDV
SHGSPGQSDVPSIAAVVSSREWPLVSKYRASVRTQPSKAEMIESLVXXNGTADDGIIKEL
LVDFYTSSNKRKPEHIIIFRDGVSESQFSQVLNIELDQIIQACKFLDENWNPKFLLMVAQ
KNHHTKFFQSSNPDNVPPGTIIDNKICHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEIGF
SPDELQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQLGTFMKFEDQSETSSSHGGITA
PGPISVAQLPKLKDNVANSMFFC
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggattcaacaaatggtaacggagctgatcttgaatcagcaaatggagcaaacgggagt
ggtgttactgatgcattaccccctccgccaccagttatacctcctaatgtggaaccagtt
cgtgtgaaaaccgaacttgctgagaagaagaacttgcgagtacctatggctcgtaaaggc
tttggaacaaggggccaaaagattccattgttgactaaccatttcagagtcgacgtggct
aatcttcagggccatttcttccactacagtgtggctctattctatgatgatggtcgtcct
gttgaagcaaagggtgttggaagaaaaatccttgacaaggtgcatgagacgtaccattct
gatctagatggtaaagagtttgcttatgacggtgagaagacgctgtttacatatggagct
ttgcctagtaacaagatggatttttctgtggtccttgaggaagtatctgttgcaaggact
aacggaaatggaagccccaatgggaatgaaagtcctagtgatggtgatagaaaaagactg
cgtaggcctaaccggtccaaaaactttaaagtggaaatcagctatgcggccaaaattcct
ctacaagctcttgctaatgcaatgcgtgggcaagaatcagaaaactcccaggaggcaata
cgggttcttgatatcatattgaggcaacatgctgctagacaaggttgcttgcttgttcga
cagtctttcttccataatgatccaaataactgtgaaccagttggtggtaacatcttagga
tgtagaggatttcactccagcttcagaacaactcagggtggcatgtcactcaacatggat
gttacaaccaccatgattatcaagcctggcccagtggtcgatttcctaattgctaatcaa
aatgcgagggatccatattcggttgactggtctaaggctaaaagaacgcttaagaatcta
aggattaaggtcagcccctcaaaccaagaattcaggatcaccggcttgagtgaaaaaaac
tgcagtgaacagacttttgaactgaagaaacggaacccagatggaaatggagagtttgag
actactgaagtgacagttgctgactacttccgcgagacaaggcatattgagttgcaatat
tctgcggatctgccatgcatcaatgttgggaagccaaagcgaccgacttacattcctctt
gagctctgcgccttgattccacttcagaggtacacaaaagcactcaacacatttcaaaga
tctgcccttgttgagaagtccagacagaaaccccaagagaggatggccgttctgtccaaa
gctctgaaagttagcaactatgatgctgaacctcttctgcgttcctgtggcatttcgatc
agctccaactttactcaggtggagggtcgtgttcttccagctcccaagctgaaaatggga
tgtggatctgaaacctttcccaggaatgggcggtggaattttaataacaagcaatttgtg
gagcccaccaaaattgaacgatgggttgttgtcaatttctctgcacgctgtaatgtacgt
caagttgttgacgatctgatcaaaattggaggatcaaaaggcattgatattgctcatccc
tttcaagtctttgaggagggtaatcaatttcgccgtgctcctcctcttaatcgtgttgag
aacatgtttaaggacatccagtcgaaactccctggtgtcccacaattcatactatgtgtg
ctccccgagaaaaagaactgtgatctctatggcccatggaagaagaaaaacttaactgag
tttggcattgttactcaatgcatggctcccacgcggcaacctaatgatcagtatcttaca
aacttacttttgaagattaatgcaaagcttggaggcctaaactcaatgttaagcgtagag
cgaacacctgcgttcactgtgatttccaaggttccaaccattatccttgggatggatgtt
tcacatggatctcctggacagtctgatgtcccgtccattgctgctgtggtgagttcgagg
gagtggccactagtctcgaagtatagagcatctgttcggactcagccttctaaggctgag
atgattgagtcccttgtnnnnnnnaacggaactgcagacgatggcattatcaaggagttg
ctggtcgatttctacaccagctcgaataagagaaagccagagcatatcataatattcagg
gatggtgtgagtgaatctcagttcagtcaggttctcaatatcgaacttgatcagatcatt
caggcttgcaagttcctggatgagaattggaaccctaaattcctcttgatggtggctcaa
aagaatcatcataccaaattcttccagtcttcgaatcctgacaatgttcctccaggaaca
atcattgacaacaaaatatgccacccaaagaacaatgatttctacctctgtgcacacgct
ggaatgattggaactactcgtccaacgcactaccatgtcctgtatgatgagattgggttt
tcacctgatgaacttcaggaacttgtccactcgctctcctatgtgtaccaaagaagcacc
actgccatttctgttgttgctccgatctgctatgctcacttggcagctgctcagcttggg
acgttcatgaagtttgaggatcagtctgagacatcatcaagccatggtggcatcacagct
ccaggaccaatttctgttgcacagctcccaaaactcaaagacaatgtcgccaactccatg
ttcttctgttaa
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