Camelina sativa (false flax): 104787056
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Entry
104787056 CDS
T05044
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00280
Valine, leucine and isoleucine degradation
csat00650
Butanoate metabolism
csat01100
Metabolic pathways
csat04146
Peroxisome
Module
csat_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
104787056
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
104787056
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
104787056
Enzymes [BR:
csat01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
104787056
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GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
104787056
NCBI-ProteinID:
XP_010510859
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Position
5:16514014..16517734
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AA seq
471 aa
AA seq
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MQWNGARRAHSLWCKSLTNNTHLHHPSIPVSHFVTTTMSSLEEPLGFDKLPSMSTMDRIQ
RFSSGACRPRDDFGMGHRWIDGRDCTTSNSCIDDDRSFVKESFPWRRHTRKLSEGEQHLL
QNISISGRTSTVSATLRESKSFKGHKYSTFSNDNGTPHITNKISKGIPKFVKIVEVGPRD
GLQNEKNIVPTSVKVELIQRLVSSGLPVVEATSFVSPKWVPQLADAKDVMDAVNSLDGAR
LPVLTPNLKGFEAAVSAGAKEVAIFASASESFSLSNINCTIEESLLRYRAVTTAAKEHGV
PVRGYVSCVVGCPVEGAVPPSKVAYVVKELYDMGCFEISLGDTIGIGTPGSVVPMLEAVM
AVVPADILAVHFHDTYGQALANILMSLQMGISIVDSSIAGLGGCPYAKGASGNVATEDVV
YMLNGLGVQTNVDLGKLIAAGDFISKHLGRPNGSKAAVALNRRITADASKI
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcaatggaatggggcgagacgagcccattctttatggtgcaagagtctaacaaacaac
actcatttgcatcatccttctattccagtctcacattttgtcaccactaccatgtcgagt
ttggaggagccgcttggctttgacaagttgcctagtatgagtacaatggataggattcag
aggttttcctctggtgcttgtcgtcctagggatgatttcggcatgggacaccgttggatt
gatggaagagattgcaccacctctaacagttgcattgatgatgatagaagcttcgttaaa
gagtctttcccgtggagaaggcatactcggaaattatctgaaggagaacaacatctgctt
cagaatatttcaatttcagggaggacttccacagtttctgcaactttaagggaatccaaa
agttttaaggggcataagtatagcacatttagcaatgacaatggcacgccacatataact
aataagatctccaaaggtataccaaagtttgtgaagattgtagaagttggtcctagggat
ggcctgcagaatgagaaaaatatagtacccacatctgttaaggtggaactaattcagaga
ttagtttcttctggattgcccgttgtcgaggctacaagttttgtatcaccaaaatgggtt
ccccagcttgcagatgcaaaggatgtaatggatgctgtaaatagtttagatggggctcga
ttgcctgttctgacaccaaatctaaaaggctttgaagcggctgtgtctgcaggtgctaag
gaagttgcaatttttgcatcagcttctgagtcattctccttgtcaaatattaactgtacc
atcgaagagagtctcttgagatatcgtgctgttaccactgctgcaaaggagcatggggtt
cccgtccgtgggtatgtatcttgcgttgtggggtgtccagtggagggagccgttccaccc
tcaaaagtggcttatgttgtgaaagaactctacgacatgggctgctttgagatatctcta
ggtgacacaattgggattggtactcctggttctgtagttcccatgctcgaagccgttatg
gcagttgtgcctgccgacatactggctgttcacttccacgacacctatggacaagctctt
gcaaacatattgatgtctctccaaatgggaataagcatagtagactcatcaattgctgga
ttaggcggctgcccatatgcaaaaggagcttcaggaaatgtagccacagaagatgtggtt
tacatgttgaatggtttaggcgtccaaaccaatgtcgacttgggaaagcttatagctgct
ggagatttcatcagtaagcatctcggccgtcccaacggttcaaaggctgccgttgccctc
aaccgtcggatcacagctgatgcctccaagatatga
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