Camelina sativa (false flax): 104787145
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Entry
104787145 CDS
T05044
Name
(RefSeq) exosome complex component RRP43 isoform X1
KO
K12586
exosome complex component RRP43
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104787145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104787145
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104787145
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
104787145
NCBI-ProteinID:
XP_010510972
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Position
5:17754539..17756749
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AA seq
330 aa
AA seq
DB search
MGLPDSSQDLSTEMEVDAFRRIFPLRFFERHLSESLRPDARPLGKARDTIVNPGKIIYNL
TLIKVKLFETCHLVCIFFVCIGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGC
IALEFHMPPICSPTVRPGRPADAAPVISKRLSDTILSSGMIDLKELCLVSGKAAWMGYLD
IYCLNADGALFDAALLSAVAAFSNLEIPVVALNDNGRIVAISGGKDEDNASIIEKKAVNK
EKRKLTLKNIPFSLTCILHKKYILADPTTEEESIMDTLVTVVLDSSDQMVSLYKSGGTVL
AYSSAVKSCVELARKRAKELKQILGEMDID
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggggttaccagattcatcacaagacttgtcgacagagatggaagttgatgcgttcaga
cgaatctttcctcttcgtttctttgagcgtcatctctctgaatctcttcgacctgatgct
agaccacttgggaaagccagagacaccattgttaaccctggtaaaataatatataactta
actttgatcaaagttaagttgtttgaaacatgtcaccttgtttgtattttctttgtgtgt
ataggacttgtttcaaccgctgatggatctgctcttgccaagattggttccactactatg
cttgctgctattagaatggaagttatgactccttctacagactcaccagatgaaggatgc
atagctcttgagttccacatgcctcctatttgttctcccactgttcgtcctggaagacca
gctgacgctgctcccgttatttcaaagcgtttgtctgatactattctaagttctggaatg
attgatcttaaagaactgtgcttagttagtggaaaagctgcttggatgggttatctggac
atatattgcctaaatgctgatggtgcccttttcgatgctgctcttctttctgctgttgca
gccttttcgaatttggaaatcccagttgttgctctgaatgacaatggaagaatagttgcc
atcagtggaggaaaagatgaagacaatgcttcgatcatcgagaaaaaagcagtgaacaag
gagaagagaaaacttacacttaagaacatccctttctctttaacttgtatactccacaag
aagtacatcttagcagatccaacaactgaagaagagtcgatcatggacactcttgtgact
gttgttttagattcctcggatcaaatggtttctctctacaaatcaggaggaaccgttctt
gcctactcatcagccgtcaagagctgtgtggagttagcaaggaagagagcaaaggagctt
aagcagattctgggggagatggatatcgactaa
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