Camelina sativa (false flax): 104787187
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Entry
104787187 CDS
T05044
Name
(RefSeq) nuclear pore complex protein NUP98B-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104787187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104787187
03036 Chromosome and associated proteins [BR:
csat03036
]
104787187
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104787187
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104787187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
104787187
NCBI-ProteinID:
XP_010511021
LinkDB
All DBs
Position
5:18648507..18653998
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AA seq
994 aa
AA seq
DB search
MFGSSNPFGQSSNNSPFGTQTQPLFGQTSNPSNNPFAVKPFGNSAPFGAQTGSSMFGGTS
TGVFGAPQTSSSPFGASSQAFGSSTPAFGASSAPAFGSSTSPFGGTSTFGQKSFGLSTPQ
SSPFGSTTQQSQPAFGNSSFGSSSPFGASNTPAFGASSTPAFGASNTSAFGASNTSAFGA
TNTPGFGASSTPAFGSTNTPAFGASSTPSFGASSSPAFGASPASAFGSSGTAFGNNAFGT
GGVFGASSTPAFGASSTPAFGASNTPSFGASSTPSFSFGSSPAFGQTTSAFGSSAFGSTQ
SPFGAQGSQASTQTVGGQSTIGGQQGGSRVMPYAPTTEAESGTGSNPGRLQSISAMPVYK
EKNQEELRWEDYQRGDKGGQRPAGQSPGGAGFGVTTSQPSVFSPSPTFGQTPANPTNPFA
QKTPTTTPNFSSPFGQPTTPSFGQPTTPSFGQPTTPSMFGSIASNATSVFGSSTSFATST
QQPFGSAPAHGSNSPFSIVGNNNTSQSSPLFGSNPSFGQSTTPAFQQTSSAFGLNTTPTF
QQTSSAFGQNTTPANGQSNIFSTPSTGSANLFSSSPSFPTSISPYGQTTPALSTPYQSVQ
PTQPSGAFVFNNFAQTQPSGNTTGVTGGTGTFSQSNFKQVPAFGNSAIMQPTPVTNPFGT
LPALPQVSIGQGGNSPSIQYGISSMPVVDKPAPVRVSPLLTSRHLLQRRVRLPTRKYRPG
DDGPKVPFFSDEENSSTPKADALFIPRENPRALFIRPVERVKSEHPKDGPAPLQENGNKS
NGVTNGTNHENKHNGETCEAPPVKANQKPNRTHENHGGEKNGSHSSPSGAEIETLMPKLH
HAEYFTEPRIQELATKERVDPGHCKRVKDFVVGRHGYGSIKFLGETDVCRLDLEMVVQFK
NREVNVYMDESKKPPVGQGLNKPAVVTLLNIKCMDKKTGTQVKEGARLDKYKEMLKRKAE
EQGAKFVSYDAVKGEWTFKVEHFSSYKLGEEDDM
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttcttcaaatccttttggacagtcatctaacaacagtccatttgggacacaa
actcaacctttgttcgggcagaccagtaacccgagcaataatccttttgctgtgaagccc
tttggtaattctgctccttttggcgcacagacagggagttccatgtttgggggcacttca
accggcgtgtttggtgcacctcaaacttcttcttccccttttggtgcttcatcacaagcg
tttgggagctctactccggcttttggagcatcttctgctcctgcatttggtagttcaact
tcaccttttggtggcacttctacgtttggtcagaagtcttttggcctctcaacgcctcag
tcaagtcctttcggaagcaccacacagcaatcacagcctgcctttggaaacagctctttt
ggttcatcttcaccttttggtgcctcaaacacgcctgcctttggtgcctctagcacgcct
gcctttggtgcctcaaacacttccgcatttggcgcctcaaacacttctgcgtttggagct
acaaacacacctgggtttggcgcatcaagcactcctgcctttggctccacaaacacgcct
gcttttggtgcatcaagtactccatcattcggcgcctcgagttcacctgcatttggcgcg
tcacccgcttcagcctttggtagctctggcactgcatttggcaacaatgccttcggtact
ggaggtgtttttggtgcatcaagcactcctgcgtttggtgcatcaagcactcctgcgttt
ggggcttcaaacactccttcctttggggcatcaagtaccccatcttttagttttggctct
tccccagcttttggacagactacctcagcatttggtagcagtgcctttggctctacacag
tctccctttggagcccaaggttcacaggcttcgacccaaacagttgggggtcaatcaact
atcgggggtcaacaagggggtagtagggtcatgccttatgcacctacaactgaggcagag
tcaggcactggtagtaaccctgggaggctacaatctatatctgccatgcctgtatacaaa
gaaaaaaaccaggaggagcttaggtgggaggactaccagcgaggagataaaggtggacaa
cgtcctgctggtcaatctcctggaggtgctggattcggtgtaacaacttctcagccaagt
gtattctctccttcaccaacgtttggccagacacctgcaaatccaacaaacccttttgca
cagaagactccaacaactaccccaaatttttcctctccctttggtcaacccactaccccc
tcctttggtcaacccactaccccatcctttggtcaacccactaccccatccatgtttggg
tcaattgcatcaaatgccacatccgtttttggatcatccactagttttgcaacaagcaca
caacagccatttggttcagcccctgcacatgggtcaaattcaccatttagcattgttgga
aataataacaccagtcagtcatctccactgttcggttcaaacccctcatttggacagagt
actactcctgcatttcaacagactagttctgcgtttggactgaataccactcctacattc
caacagactagttctgcgtttggacagaataccactcctgcaaatggacaaagtaacatt
ttcagtacaccttccactggctccgcaaatctgttttcaagctctccatccttccctaca
agcatctctccctatggtcaaacaacgcctgctctttcgacaccttaccaatcagttcag
ccaactcaaccgtcaggtgcttttgttttcaacaactttgctcaaacccaaccatcaggt
aatacaactggcgttacaggtggaacgggaacttttagccaaagcaactttaagcaagtg
cctgcgttcggtaactctgctattatgcaaccaactcctgttacaaacccatttggaacg
cttcctgctttgcctcaggtttcaattggtcaaggtggaaattcaccttccattcagtat
ggaatctccagcatgcctgtcgttgataagcctgctcctgttagagtatctccactcctg
acttctcgacaccttttacaaaggcgggtcaggctacctacaaggaagtaccgtcctggt
gatgatggtccaaaggttccattcttcagcgatgaagagaattccagtacacctaaggct
gatgcccttttcattccaagggaaaaccctagagctctatttatacgcccagttgaaagg
gtaaaatcagaacatccaaaggatggcccggccccactgcaggagaatggtaataagtca
aatggggttacgaatggaaccaaccatgagaataagcataacggtgaaacttgtgaggct
cctccggttaaagccaatcagaaaccgaacagaacacatgaaaatcacggaggcgagaaa
aacggttcacacagttcaccaagcggagcagagatcgagacattgatgccgaagttgcac
cacgctgaatatttcacagagcctcggatccaagaactggctacaaaagaaagggttgat
ccgggtcattgcaagcgggtgaaggactttgttgttgggagacacggttacgggagtata
aagtttctgggagagacggatgtgtgtagactcgacctggaaatggtggttcagttcaaa
aaccgagaagtgaatgtgtacatggacgagagcaaaaaacctcctgtgggtcaaggattg
aataaacctgcggttgtaactttgctgaacataaaatgtatggacaagaagaccggtacg
caagtgaaggaaggtgccagattggacaagtataaggaaatgctgaagaggaaagctgag
gaacaaggagctaagtttgtgtcttatgacgctgtgaaaggcgagtggacgttcaaggtg
gagcatttcagttcctacaagcttggagaagaagatgatatgtag
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integrated database retrieval system
