KEGG   Camelina sativa (false flax): 104787441
Entry
104787441         CDS       T05044                                 
Name
(RefSeq) exosome complex component RRP4 homolog
  KO
K03679  exosome complex component RRP4
Organism
csat  Camelina sativa (false flax)
Pathway
csat03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104787441
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104787441
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     104787441
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     104787441
SSDB
Motif
Pfam: RRP4_S1 KH_6 RRP40_S1 ECR1_N
Other DBs
NCBI-GeneID: 104787441
NCBI-ProteinID: XP_010511328
LinkDB
Position
5:22987533..22988903
AA seq 301 aa
MMRKLQLELPLNQTQKVRFERSMERLQLLSSTTNNSVIVADSINEDAFLLKGHGTSEVDG
ELLATVCGVVVHVDKLVYVRTLRAKYKPEVYDVVVGRVIEVSQSFWRVELNSTQDGVLKL
SSTNMSDAVQKRKRSVDELNMRDIIVEDDVVCAEVGCIHRDGRLELKALSHKYGKLDNGE
LLKVDPYLVKKSMNHFHYLESLGIDLILGRNGFIWVGEHAQVKDPNQNTGNEKSYTPLET
RQSILRIGNAIRVLSNLGFTMTLEVIMETVKLSNTDNIDVHDMLGSEFHVLVAENEAERR
R
NT seq 906 nt   +upstreamnt  +downstreamnt
atgatgagaaagcttcagctagagctaccattgaaccagacgcagaaggtccggtttgag
agatctatggagcggctacaattgttgtcgtcaaccacaaacaactctgtaatcgttgcc
gactccatcaacgaagatgcattcctccttaagggacatggaacctccgaggtagatggt
gagttgctagcgacggtctgtggagttgtggttcatgtggacaagcttgtctacgtacga
accttgcgagccaagtacaaacctgaggtttacgatgttgtggtaggacgtgtgattgag
gtctctcaaagcttttggagagtggagctaaactctactcaagatggagtactaaagctt
tcttccacgaatatgtctgatgctgttcagaagcgaaaaaggtctgtggatgaactcaat
atgcgcgacattattgtagaagatgatgtcgtttgtgccgaagtgggatgtattcaccgt
gatggtagattggagctaaaagctttaagtcacaagtatggaaagctcgacaacggagag
ctactcaaggttgatccttacttggttaagaaaagcatgaatcactttcattacttagaa
agtcttggcatcgatttgattcttggccgcaatggctttatttgggtcggggaacacgcc
caagtcaaagatcctaaccagaacacaggaaacgagaaaagctatacgccactcgagact
cgacaaagcattctcagaattgggaatgcgatacgggtcttgtctaatctaggcttcacc
atgactctagaagtgattatggaaactgttaagttaagcaacacggataatattgacgta
catgacatgcttggatcagagtttcacgttttggtggcagagaacgaagctgaaagaaga
agatga

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