Camelina sativa (false flax): 104787547
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Entry
104787547 CDS
T05044
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Module
csat_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104787547
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104787547
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104787547
NCBI-ProteinID:
XP_010511451
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Position
5:complement(24745362..24747031)
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AA seq
397 aa
AA seq
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MTFSLSLVQVFSIVTTIIMSHFGKSDARTSLNVLSFGAKPNGVVDSVKAFSDAWDAACEV
ADSVVIYVPKGRYLVSGEVRFEGESCKSRDITLRIDGTLIGPQDYRLLGKRENWFSFIGV
HNVTVLGGSFDAKGSTLWSCKANGYNCPEGATTLRFMDSFNVRIKGVLSLNSQLFHIAIN
RCRNIKIEDVRIIAPDDSPNTDGIHIQLSTDIEVRNASIKTGDDCISIGPGTKNLMVDGI
TCGPGHGISIGSLAKSTEEQGVENVTVKKAVFVQTDNGLRIKSWPRYSNGFVERVRFLGA
LMVNVSYPIVIDQNYCPGDSSCPSQESGIKINDVIYSGIMGTSATKIAIKMDCSERVPCT
GIRMQAINLTYYGEAAKTSCINVSGKQLGLVTPSGCL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgacattctctctaagccttgttcaggtctttagcatcgttacaacaatcattatgtcc
cactttggtaagtctgacgcaagaacaagtcttaacgttctgagctttggcgcaaaacca
aacggagtggtagactcggtaaaagctttttcggatgcatgggatgccgcgtgtgaagtg
gcagactcggtcgtgatttacgtacctaaaggaaggtatttggttagcggagaggttcgg
tttgaaggagaaagttgtaaaagccgcgacataacattaaggattgacggaactttaatt
ggtccgcaagactacagattgcttgggaaaagagaaaactggtttagttttattggtgtt
cacaatgttacggttcttggtggttcttttgatgctaagggatcaaccttgtggagctgc
aaagccaatggttacaactgccctgaaggtgcaacgacattgagattcatggactcgttc
aacgtgaggatcaaaggagtattgtcattgaatagccaattgttccacatagcaataaac
cgttgcagaaacataaagattgaagatgtccggatcatagcaccagatgatagccccaac
actgacggcattcacatccagctatcaaccgacatcgaggtccgaaatgcttctatcaaa
accggagacgattgtatctcgatcggaccgggtacaaagaaccttatggtagatggaatc
acttgtggtcctggacacggaatcagcattgggagcttagcgaagtccacagaggagcaa
ggcgtggaaaacgtgactgtgaagaaggctgtgtttgtacaaacggacaatggactaagg
ataaagtcgtggccacgatatagtaacgggttcgtggaaagggttcggttcttaggggct
cttatggtcaacgtttcttatcctatcgtcatcgaccagaactattgcccaggcgattct
tcttgcccttctcaggagtcgggaatcaaaataaacgatgtaatatatagcggaatcatg
ggaacatcagccacaaagattgctataaagatggattgcagtgagcgagtaccatgcact
gggattcgaatgcaagcgattaatctaacttactatggtgaagcagcaaagacttcttgc
ataaatgtttctggtaagcaacttggtttggttacacctagtggatgtctctga
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