Camelina sativa (false flax): 104787581
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Entry
104787581 CDS
T05044
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104787581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104787581
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104787581
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
104787581
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
104787581
NCBI-ProteinID:
XP_010511491
LinkDB
All DBs
Position
5:complement(25714217..25715975)
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AA seq
345 aa
AA seq
DB search
MAGEASSSRQKRQRLVEEEGENGGGDAAVARSGTLVDLDLFYCPVCSDSLTIPIFRCDNG
HIACSSCCTKMKNVCPDCGDSIGDFRCLIMEKILEAFDVGRGFLFDLHLLDCPVCSNALT
APIFECDSGHIACSSCCKKQRYKCTACSLPIGNYRCRIMERLVEAIFIPCPNAKHGCREM
FYYGKKLVHQKECIFAPCYCPALGCNYSGLYKDLYSHYETNHKCGKKHFRSRHDADAWVH
VDDKILVLQEYRDGPLVVIQCFQKPEGVSVTVNCIAPSAPGVGEFSFLLSYSREGEYWAL
GSDKMNRIHKVSFQAPEKYFITVPMSDFKMKIRINRITEEIENEV
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggccggagaagcatcgagcagccgccaaaagaggcaacgacttgtagaagaagaaggc
gagaatggtggaggtgatgcggcggtggcaagatctgggacattggtggacctagatctt
ttctattgtcccgtttgctctgactcactcacgattcctatctttcggtgtgacaatggc
cacatagcatgttcttcgtgttgtactaaaatgaaaaacgtatgccctgattgtggggat
tccattggtgacttccgatgcctgataatggaaaaaatcttggaagccttcgatgttggt
agagggttcctgttcgacctacatcttctcgattgtcctgtttgctctaacgcactcact
gctcctatctttgagtgtgacagcggacatattgcatgttcgtcgtgctgtaagaaacag
aggtataaatgcactgcttgtagtttaccgatcggtaactaccgatgccgaataatggag
aggcttgtcgaggcaatctttatcccatgcccgaacgccaaacatggttgtcgtgagatg
ttctattacggaaaaaaattagtccatcagaaagaatgcattttcgctccgtgctattgt
cctgcattaggctgcaactacagcggcttgtacaaggatctgtatagccactacgaaact
aaccacaagtgtggcaaaaaacatttcagaagtcgccatgacgctgacgcatgggtacac
gtcgatgataagattcttgtccttcaggaatatcgagatggtccattggttgtgattcag
tgtttccagaagccagaaggagtgtctgtgactgtgaactgtatagcaccttctgctcca
ggagttggggagttctcttttctactctcctactcgcgtgaaggtgaatattgggcactt
ggatcagataagatgaataggattcataaagtgagcttccaagctcctgagaagtacttc
ataacagttcccatgtctgattttaagatgaagattcgtatcaaccggataaccgaagag
atagaaaatgaagtctaa
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