Camelina sativa (false flax): 104787582
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Entry
104787582 CDS
T05044
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104787582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104787582
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104787582
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
104787582
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
ZnF_RZ-type
Motif
Other DBs
NCBI-GeneID:
104787582
NCBI-ProteinID:
XP_010511492
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Position
5:complement(25719911..25721401)
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AA seq
309 aa
AA seq
DB search
MDGEASSSRRKRQRAPAVAEEEAENGGGGDEVTRSGTMFELDLLDCPICCYALTIPIFQC
DNGHIACSSCCTKVRNKCPSCTLPIGNFRSRIMERVVEAVIVPCPNARLGCTEKFSYGKE
LAHEKICRFALCYCPIPDCDYSGVYKDLYSHYYANHDDEHSWNKFVCGRSSGAWLLISDK
ILVLQESADGPLVVLQCFKEPQGFYVTVSCIAPSAPGVGEFSYHLSYKSGGKTMTFELEE
MERIQKVSYRTPEKDFMLVPYYFQEQGIRLKMNICIRRLQNNEEEEEEEEEEEEEEEEDD
DEEDADEEE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggatggagaagcttcgagcagccgccgtaagagacaacgagctcccgccgttgctgaa
gaagaagccgagaatggtggaggaggagatgaggtgacacgatctgggacaatgttcgag
ctagatctcctcgattgtcccatttgttgttacgcactcacgattcctatctttcagtgt
gacaatggacatatagcttgttcgtcttgttgtactaaagtgaggaacaaatgcccttct
tgcactttacccattggtaactttcgatcgagaataatggagagagttgttgaagctgtc
attgtgccatgcccaaacgccagacttggttgtactgagaagttctcctatgggaaagag
ttagcccatgagaagatatgcaggttcgctctgtgctactgtcctataccagactgtgac
tacagtggcgtgtacaaggatctctatagtcactactatgctaaccacgacgacgaacac
tcatggaataaattcgtgtgtggccgttcctctggcgcatggctgctcataagtgataag
attcttgttcttcaggaatctgcagatggtcccttggttgtgcttcagtgttttaaggag
ccgcaaggattttacgtgactgtgagttgtatagcaccttctgctccaggagttggtgag
ttctcctatcatctctcctacaagtctggaggtaaaactatgacgtttgaactggaggag
atggaaaggattcagaaagtgagctatcgaactcctgagaaggactttatgttggtccct
tactatttccaggagcaggggattcgtttgaaaatgaatatttgcatccgccggctacaa
aacaatgaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagatgat
gatgaagaagatgctgatgaagaagagtaa
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