KEGG   Camelina sativa (false flax): 104787651
Entry
104787651         CDS       T05044                                 
Name
(RefSeq) THO complex subunit 4C
  KO
K12881  THO complex subunit 4
Organism
csat  Camelina sativa (false flax)
Pathway
csat03013  Nucleocytoplasmic transport
csat03015  mRNA surveillance pathway
csat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104787651
  09122 Translation
   03013 Nucleocytoplasmic transport
    104787651
   03015 mRNA surveillance pathway
    104787651
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104787651
   03041 Spliceosome [BR:csat03041]
    104787651
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     104787651
    TREX complex
     104787651
Spliceosome [BR:csat03041]
 Complex C
  Other components
   EJC/TREX
    104787651
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    104787651
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3
Other DBs
NCBI-GeneID: 104787651
NCBI-ProteinID: XP_010511553
LinkDB
Position
5:complement(26881121..26883825)
AA seq 289 aa
MSSDALNMTLDEIVKRSKSTRSAAAKSAKSGGKGISQRGRGRGGPVGGGGRGAGPVRRGP
LAVNARPSINKLVRRKRNLPWQNQNDLYEESLRAVGVPVVEVGTTVYITNLDQGVTNEDI
RELYAEIGELKRYAVHFDRNGRPNGSAEVVYMRRSDAMLAMKKYNNVLLDGRPMRLEILG
GSTEAAPIAARVNVTGLNGRMKRSVFIGQGVRGGRVRRGRGSGPSMRRPAAQQNQQGGGG
RGGLRGRGRGAGGGRGNKSGRGGKKQVEKSAADLDKDLESYHAEAMNIS
NT seq 870 nt   +upstreamnt  +downstreamnt
atgtcttcagacgcattgaacatgacgcttgatgaaattgtcaagaggagtaagagtaca
aggtctgcagctgcaaagtctgcaaagtctggaggaaaagggatttcccaacgtggacgt
ggacgtggtggacctgtaggtggtggtggaagaggagctggacctgttcggagaggtcct
cttgctgttaacgctcggccgtcaataaacaagcttgtccgcaggaagaggaacttgcca
tggcagaatcagaatgatttgtatgaagaaagcctgagagctgttggggtaccagtagtg
gaagttggaaccacagtttatattaccaaccttgatcagggagtgacgaatgaagatata
agggaactatatgctgagattggagagctgaaaagatatgcagttcactttgacaggaat
gggcgtccaaatggctcggctgaagttgtgtatatgagaagaagtgatgcaatgctagct
atgaagaaatacaacaatgtactcttggatggaaggcctatgagactggagattctgggt
ggaagtactgaggctgctcctattgctgctcgggttaatgtaactggattgaatggaagg
atgaagaggagtgtcttcattggacaaggagttagaggtgggagagtaagaagaggaaga
ggttcaggtccttctatgagacgccctgcagcccaacaaaaccaacagggaggtggtggt
cgaggtgggcttcgtggtagaggccgaggtgccggtggtggcagagggaataaaagcggc
cgaggtggaaagaagcaggtggagaagtcggctgcagaccttgacaaagatctcgaaagc
tatcatgctgaagctatgaacatctcttaa

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