Camelina sativa (false flax): 104787651
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Entry
104787651 CDS
T05044
Name
(RefSeq) THO complex subunit 4C
KO
K12881
THO complex subunit 4
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
csat03015
mRNA surveillance pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104787651
09122 Translation
03013 Nucleocytoplasmic transport
104787651
03015 mRNA surveillance pathway
104787651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104787651
03041 Spliceosome [BR:
csat03041
]
104787651
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104787651
TREX complex
104787651
Spliceosome [BR:
csat03041
]
Complex C
Other components
EJC/TREX
104787651
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104787651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
Motif
Other DBs
NCBI-GeneID:
104787651
NCBI-ProteinID:
XP_010511553
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All DBs
Position
5:complement(26881121..26883825)
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AA seq
289 aa
AA seq
DB search
MSSDALNMTLDEIVKRSKSTRSAAAKSAKSGGKGISQRGRGRGGPVGGGGRGAGPVRRGP
LAVNARPSINKLVRRKRNLPWQNQNDLYEESLRAVGVPVVEVGTTVYITNLDQGVTNEDI
RELYAEIGELKRYAVHFDRNGRPNGSAEVVYMRRSDAMLAMKKYNNVLLDGRPMRLEILG
GSTEAAPIAARVNVTGLNGRMKRSVFIGQGVRGGRVRRGRGSGPSMRRPAAQQNQQGGGG
RGGLRGRGRGAGGGRGNKSGRGGKKQVEKSAADLDKDLESYHAEAMNIS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagacgcattgaacatgacgcttgatgaaattgtcaagaggagtaagagtaca
aggtctgcagctgcaaagtctgcaaagtctggaggaaaagggatttcccaacgtggacgt
ggacgtggtggacctgtaggtggtggtggaagaggagctggacctgttcggagaggtcct
cttgctgttaacgctcggccgtcaataaacaagcttgtccgcaggaagaggaacttgcca
tggcagaatcagaatgatttgtatgaagaaagcctgagagctgttggggtaccagtagtg
gaagttggaaccacagtttatattaccaaccttgatcagggagtgacgaatgaagatata
agggaactatatgctgagattggagagctgaaaagatatgcagttcactttgacaggaat
gggcgtccaaatggctcggctgaagttgtgtatatgagaagaagtgatgcaatgctagct
atgaagaaatacaacaatgtactcttggatggaaggcctatgagactggagattctgggt
ggaagtactgaggctgctcctattgctgctcgggttaatgtaactggattgaatggaagg
atgaagaggagtgtcttcattggacaaggagttagaggtgggagagtaagaagaggaaga
ggttcaggtccttctatgagacgccctgcagcccaacaaaaccaacagggaggtggtggt
cgaggtgggcttcgtggtagaggccgaggtgccggtggtggcagagggaataaaagcggc
cgaggtggaaagaagcaggtggagaagtcggctgcagaccttgacaaagatctcgaaagc
tatcatgctgaagctatgaacatctcttaa
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