Camelina sativa (false flax): 104787761
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Entry
104787761 CDS
T05044
Name
(RefSeq) DNA polymerase zeta catalytic subunit-like isoform X1
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
104787761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104787761
Enzymes [BR:
csat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
104787761
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
104787761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
POL3_N
REV3_N
zf-C4pol
DNA_pol_B_exo1
DZR_2
Motif
Other DBs
NCBI-GeneID:
104787761
NCBI-ProteinID:
XP_010511686
LinkDB
All DBs
Position
5:complement(28799958..28810241)
Genome browser
AA seq
1913 aa
AA seq
DB search
MDESQSGSNVFSLRIVSIDYYMASPIPGFDICYSSFQGGEVNEVPVIRIYGSTPAGQKTC
LHIHRALPYLYIPCSEIPLEQHKVDGSSTLDVSLELEKALKLKGNAASKRQHVHDCEIVR
AKKFYGYHSTEEAFVKIYLYHPPDVARAASLLLSGAVLGKILQPYESHIPFILQFLVDYN
LYGMGHVHISKMKFRNPVPHHFVPRRFDLEDCAGKIDKVATTKENLSAAASVSFPVWSLS
TIPGQWMWKPFEESDTPLSQSQHRDHYRRQSLCELEGDATVSGNFPETKYNYFCYIYERT
FELAFSLVDILNQQFKMYNSLSQAQSDTNMVQSLVAIWEEEYERTGMHDAPIPPDPGKPS
AADVLKTMSDYAGFKTKLKEMHNEVELSPSDMNPIAVSSAGPDMHAKPEITDLQVLNHMV
GTRSIYPASEQLSPLGDKSGEASMGNDEYITTPTDRGTPAETQDAEALGLFKWFASSQAA
EDINSDDEILRETILSPLLPLASMNKVLEMASTDYVSQSQKECQDILDSQEDLPDFGSST
KRDLPSNPDSHNLISSSDKQSLETVVASDVPDISTSNGESENSFQRYRKSDKNKNRSFSK
SNKPSNSVWGPLPFTLTKNLQKDFDSTNASVKLGLTKISSDPMNEMTDYNVPLKEHQADV
CNTIDRNVLAGCSLRDLMRKKRLCHGDSPVSQHMKCRKVLPQTRDSRSGKKKECTSRAEA
KKQGPALSAELSEFDYGDAPPTLSPMGVGNCECNISTQSSELHSVDRCSAKETAGQSSDE
ISRKFSSTTVPLGQDPQTMDSETLVSSNKLVEIEIDDVQKPGVEHESTANGIDETGRLIC
LTLNKKPPSLDCLSAGLQDSAHSNEIPAQFHHAREKQHGGYERNSKEIPFFPLKDIEFNK
DEKKHLFDGASIGIPFHHLNDGSNLYLLTPALSPPPVDSVLQWISNDKGPGDSEIYSKNQ
PLGDEHIDHGASFTDLASASNVMSVSEHMQHHNKNSESNAYTESDIDLKHKGNSLNFQTS
VSQEMSQISGPDGTSGPTPLSQIGFRDPASMGAGQQLTVLSIEVHAESRGDLRPDPRFDS
VNVIALVVQNDDNFATEVFVLLFSPDCIDQRNVDGLSGCKLSVFVEEKQLFSFFIETLCK
WDPDILLGWDIQGGSIGYLAERAAQLGIRFLNNISRTPSPTTTSDSNKRKLANSLLPDPL
VADPAQVEEVVIEDEWGRTHASGVHVGGRIVLNAWRLIRGEVKLNMYTIEAVSEAVLRQK
IPSIPYKVLTEWFSSGPAGARYRCIEYVIRRANLNLEILSQLDMINRTSELARVFGIEFF
SVLSRGSQYRVESMLLRLAHTQNYLAISPGNQQVASQPAMECVPLVMEPESAFYDDPVIV
LDFQSLYPSMIIAYNLCFSTCLGKLAHLKMNTLGVSSYSLDLDVLQDLNQIMQTPNSVMY
VPPEVRSGILPRLLEEILSTRIMVKKAMKKLTPSEAVLHRIFNARQLALKLIANVTYGYT
AAGFSGRMPCAELADSIVQCGRSTLEKAISFVNANDKWNARVVYGDTDSMFVLLKGRTVK
EAFLVGQEIASAISEMNPHPVTLKMEKVYHPCFLLTKKRYVGYSYESPDQSEPIFDAKGI
ETVRRDTCEAVAKTMEQSLRLFFEKKNISKVKTYLYRQWKRILSGRVSLQDFVFAKEVRL
GTYSTRDSSLLPPAAIVATKSMRADPRTEPRYAERVPYVVIHGEPGARLVDMVVDPLVLL
DIDTPYRLNDLYYINKQIIPALQRVFGLVGADLNQWFLEMPRATRISLGQRPLNSRNSHK
ARIDYFYLSKHCILCGEVVQESAQLCNRCLKNKSAAAATMIWKTSKLEREMQHLATICRH
CGGGDWIVQCGVKCNSLACSVFYERRKVQKELRGLASIATESDLYPKCMAEWF
NT seq
5742 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtctcagtccggttctaatgtattcagcttacggattgtttcgatcgattat
tacatggcttctccgatccctggttttgatatttgctacagtagctttcaaggtggtgag
gtaaatgaagtccctgttataaggatatatggctctacacctgctggtcagaagacttgc
ttgcacattcatcgtgctttaccatatctctatattccatgttcagagattccacttgag
cagcataaagttgatggaagtagtacacttgatgtatcccttgagttggagaaagcatta
aagcttaagggaaacgctgcttcaaaaaggcaacatgtccatgattgtgagattgttaga
gcaaagaagttctatgggtaccattcaacagaggaggcatttgttaagatttatctctac
catccacccgatgtggctcgtgctgccagtcttcttctgtcaggtgctgttcttggtaaa
attttgcagccttacgagtctcatattccctttattctccagtttctggttgattataat
ttgtatggaatgggtcatgtgcatatatcaaagatgaagttccgtaatccagtgcctcac
catttcgttccaaggagatttgatttggaagattgtgcgggaaagattgacaaagtggct
actacaaaggaaaatttaagtgctgctgcaagcgtcagttttcctgtttggagcttgtca
acaatcccaggtcaatggatgtggaagcccttcgaagaatctgatacaccgttgagtcag
agccagcatagggaccattacagacgtcagagtctctgtgaacttgagggagatgctact
gttagtggtaattttcctgaaacgaaatataattatttttgttacatttatgaacggacc
tttgaactagctttttctcttgtagatattctcaatcaacagtttaaaatgtacaactcc
ctttcacaagcccagtctgatacgaacatggttcagtcgcttgtggcaatttgggaggag
gagtatgaaaggactggcatgcatgatgcacctatacctcctgatccgggcaaaccttct
gcagctgatgtgttgaagactatgtcagattatgctgggtttaagactaaacttaaagaa
atgcataacgaagttgaattgtctccatctgatatgaatcctattgcggtatcgtcagcc
ggtccagatatgcatgccaaacctgaaattactgatctgcaggttttgaatcatatggtt
ggtacacgcagtatttatcctgcatcagaacagctttctcctcttggtgataagagtgga
gaagcatcaatgggaaatgatgaatatatcacaacacccacggacagagggacacctgct
gaaacacaagatgctgaagccttgggtctctttaagtggtttgcctcatcccaggctgca
gaggacataaactctgatgatgaaatcctccgggaaactatccttagtcctcttttgcct
ttagcgtccatgaacaaggttcttgaaatggcgagtacagattatgtgagccaatcccaa
aaggaatgtcaagacattcttgattctcaggaggatctaccagactttgggagttcaaca
aaaagagatttacctagtaatcctgatagccataatcttatatcttcatcagacaaacaa
tctcttgaaacagtagtcgctagtgatgttccagatatctccacttcaaatggagaaagc
gaaaattcattccaaagatacagaaagagtgataagaataagaacaggagcttctctaag
agcaacaagcctagcaactcagtatggggacctttaccttttacactgaccaaaaatctt
cagaaggactttgacagtacaaatgctagtgttaaacttggtttaacaaagattagttca
gatcctatgaatgagatgacagactataatgttccactcaaagaacatcaagcagatgtt
tgtaacacgatcgacagaaacgttttggctggatgttctctgcgggacttgatgagaaaa
aaacggttatgccatggagactcgcctgtttcacaacatatgaagtgtaggaaggttcta
ccacagaccagagattcccgatccgggaaaaaaaaggagtgcacctcgagagctgaggca
aaaaaacaaggtcctgctctttctgcagaattaagtgaatttgattatggcgatgcccct
ccaactttatctcctatgggtgttgggaattgcgagtgtaatatatccactcagtcatct
gaacttcattctgttgatagatgttcggctaaagagacagcaggtcaaagcagtgatgaa
atttcaaggaaattttcatctaccactgttccacttggtcaggatccgcaaactatggat
tcagaaacattggtgtctagcaataaacttgttgagattgaaatagatgatgtccaaaaa
cctggggtggagcacgagtcaactgccaatggaattgatgagacaggaagattaatatgc
ctaaccttaaacaagaagcctccttctctcgattgcttaagtgctggactgcaggattct
gcacattctaatgaaattcccgctcagtttcatcatgctagagaaaaacagcatggcgga
tatgagcggaattccaaggagatcccattttttcccttgaaggacattgaattcaacaag
gatgaaaagaaacacttgttcgacggagcttccattggtattcccttccatcatctcaat
gacggttccaacctttacctactgacccctgccttgtcgccgcctcctgtggattctgtt
ttacaatggatatcgaatgacaaaggtccaggagactctgaaatttattcaaaaaatcaa
ccattaggagatgagcatattgatcatggggcgagtttcactgatcttgcttctgcatct
aatgtgatgtctgtgtctgagcacatgcagcaccataataagaattcagaatcaaatgct
tatacagagtctgatatagatctgaaacacaaaggaaatagtcttaactttcagactagt
gtttcccaagagatgtctcagatttcaggtcctgatgggacatcagggcccactccctta
agtcaaattggattccgagatcctgcgagcatgggggcagggcaacagcttacagtgctg
agtatagaggttcatgcagagtctagaggggacctgcgacctgatccacgatttgattct
gtcaatgtcatagctctcgtcgtgcagaatgacgataattttgcaactgaagtatttgtg
cttttatttagtccagattgcattgatcagaggaatgttgatggcctatctggatgcaag
ttgtctgtcttcgttgaagagaagcaactattcagttttttcattgagaccttatgtaaa
tgggatccagatattcttttgggctgggatatacagggtggatccattggttatttggct
gaaagggctgcacagcttggtataagatttctcaataatatatctaggacgccatccccg
accacgaccagtgattcaaataagagaaagcttgctaatagtctactgccagacccgttg
gtagctgatcctgctcaagtagaagaagtggtaattgaggacgagtggggccgcacacat
gctagtggtgtccatgttggaggtcgaattgttctcaatgcatggcgtttgattcgcggg
gaagttaaactcaacatgtacacgattgaagctgtgtcagaggctgttttgaggcaaaag
attccatcaatcccctataaagtattgacagaatggttttcgagtggtcctgctggtgca
agatatcgatgcatagaatatgtgattcgccgagcaaatttgaaccttgagattctgagc
caacttgacatgataaatcgtacgtcagaacttgcacgtgtttttggcatagaatttttc
tcagttctctcccgaggttcccaatacagagtggaatccatgcttttaagattagcacat
acacaaaattatcttgccatatctccaggaaatcaacaggttgcttctcagccagctatg
gaatgtgtacctcttgtgatggaaccagagtctgcattctacgatgatcctgttattgtg
ttggattttcaatctctctacccttcaatgattatagcatataatttgtgcttttctaca
tgtctcggaaaacttgcacatttgaagatgaacacccttggggtcagctcatactctcta
gaccttgatgttcttcaggatttaaatcagatcatgcagaccccaaacagtgtgatgtac
gtgccaccagaggtacgtagtggaattttaccaaggctgctagaggaaattttatctaca
agaataatggtgaaaaaagcaatgaaaaagttgactccttcagaagcagttcttcaccgg
atatttaatgcgaggcagcttgctttaaagctaatagcaaatgtgacttatggctatact
gctgctggcttcagtggtcgaatgccttgtgcagagctggcagatagcattgtccagtgt
ggtcgtagcacacttgagaaggctatttcgttcgtcaatgcaaatgataaatggaacgct
agagttgtgtatggtgacactgatagtatgtttgtcctcctcaaaggacggaccgtaaaa
gaagcttttttagttggacaagagattgcatctgcaatatctgaaatgaacccacaccca
gtcactttaaagatggagaaagtctatcacccttgtttccttcttactaagaagcgctat
gttgggtacagttatgaaagtccagatcagagtgagcctatatttgatgcaaaaggtatt
gaaactgttcgaagagacacttgtgaagccgttgcaaaaactatggagcaatcgttgaga
ctcttttttgaaaagaagaacatctctaaggttaagacatacttgtatagacagtggaag
cggatactatcagggagagtgtctctccaagattttgtctttgcaaaagaagttcggttg
gggacttatagcacaagagactcttcactccttcctccagcagctattgtggcaaccaaa
tcaatgagagcagaccctcggacagagccacgctatgctgaacgagtgccttatgttgtg
atccatggggagcctggagctcgacttgttgatatggtggtggacccactggttcttttg
gacatcgatacaccctaccgattgaatgacttatactacatcaacaaacaaattatacca
gctttgcaaagggtgtttggacttgtgggtgcagacttaaaccagtggtttttggagatg
ccccgtgccaccagaatttcccttggtcaacgtcccttaaactctagaaactcgcacaaa
gctagaattgattatttttatctctcgaaacattgcatcttgtgtggggaagttgttcag
gaatctgctcagctatgcaaccggtgcctcaaaaataaaagtgctgctgctgcaaccatg
atttggaagacttcaaaattggagagagagatgcaacacctagccacgatatgcagacac
tgtggtgggggagactggattgtgcaatgcggagtgaaatgcaattccctcgcttgctca
gtcttttacgagagacggaaagttcagaaggaacttcgtggcctcgcctccattgctaca
gagagtgacctttacccgaaatgcatggctgagtggttctaa
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integrated database retrieval system
