Camelina sativa (false flax): 104788608
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Entry
104788608 CDS
T05044
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104788608
Membrane trafficking [BR:
csat04131
]
Autophagy
Other autophagy associated proteins
Others
104788608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
ANAPC4_WD40
Beta-prop_Vps41
BCAS3_WD40
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_IFT140_2nd
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
EIF3I
Ge1_WD40
Nucleoporin_N
PEP5_VPS11_N
ART
Motif
Other DBs
NCBI-GeneID:
104788608
NCBI-ProteinID:
XP_010512671
LinkDB
All DBs
Position
5:complement(34571071..34573676)
Genome browser
AA seq
436 aa
AA seq
DB search
MATVSSSWPNPNNPNPDSTSSDSSTLPSHRDRGDDTESLDSFSSMTLNSSEDDPNLNSDP
IPNPNHAVTLPISPPTPNLPVTPLPSVLHLSFNQDHACFAVGTDRGFRILNCDPFREIFR
RDFDRGGGVAVVEMLFRCNILALVGGGPDPQYPPNKVMIWDDHQGRCIGELSFRSDVRSV
RLRRDRIIVVLEQKIFVYNFSDLKLMHQIETIANPKGLCAVSQGIGSMVLVCPGLQKGQV
RIEHYASKRTKFIMAHDSRIACFALTQDGHLLATASSKGTLVRVFNTVDGTLRQEVRRGA
DRAEIYSLAFSSNAEWLAVSSDKGTVHVFGLKVNSGAQVKETSRIASELTRSNSSPSSSL
SLFKGVLPKYFSSEWSVAQFRLVEGTQYIAAFGHQKNTVVILGMDGSFYRCQFDPVNGGE
MTQLEYHNCLKPPSVF
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgtctcctcctcctggcccaatccaaacaaccctaaccccgattccacatct
tccgattcttctactcttccatctcaccgcgatcgtggagacgacaccgagtctctcgat
tccttctcctccatgaccctcaactcctccgaagacgaccctaatctcaactctgatccg
attcccaatcctaaccacgccgttactcttcctatttctccccctacgcctaatttaccg
gtgactcctcttccgtccgtgcttcacctctctttcaaccaagaccatgcttgtttcgcc
gtcggcaccgatcgtggcttccggatccttaactgcgatccctttcgcgagatttttcgc
cgtgatttcgatcgtggcggtggtgttgccgtcgttgagatgcttttcagatgcaatatc
ttagcactcgtaggtggtggtcctgatcctcagtatcctcctaacaaggtcatgatttgg
gatgatcaccagggacgatgtatcggagagctttcttttaggtccgatgttcgatcggtc
cggcttaggagggatcgtattatcgtcgttctggagcagaagatttttgtttacaacttc
tctgaccttaagctgatgcatcagattgagactattgcgaatcctaagggcttgtgtgct
gtctctcagggtattggttctatggttttggtttgtcctggtttgcagaaaggtcaagtt
cggattgagcattatgcttctaaacgcaccaagttcatcatggctcatgattcgagaata
gcttgctttgctcttactcaggatggacatttgttggctacagctagctccaagggtact
ttggttcgtgtgttcaataccgttgatggtaccttgcggcaagaggttaggagaggtgca
gatagagcggagatctatagtttggccttctcttcaaatgctgagtggttagctgtctca
agtgacaaaggaactgtccatgttttcggtctcaaagtcaattctggagctcaagtgaaa
gagacatcacgtattgcatctgaacttactcgctctaattcatccccatcttcgtctcta
tcattattcaaaggagtgttgccaaagtatttcagctcggagtggtcggtggctcagttc
cggttggttgaagggactcagtacatagccgcctttggtcatcagaagaacacagttgtt
attcttggcatggatgggagcttctatagatgccagtttgatccagtgaacggcggggaa
atgactcagcttgagtatcacaactgcctgaaaccgccttctgttttctag
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