Camelina sativa (false flax): 104788631
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Entry
104788631 CDS
T05044
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
csat
Camelina sativa (false flax)
Pathway
csat04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104788631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104788631
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
104788631
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
DUF7885
F-box
LRR_NXF1-5
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
104788631
NCBI-ProteinID:
XP_010512696
UniProt:
A0ABM0ZAD4
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Position
5:complement(34650062..34653207)
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AA seq
594 aa
AA seq
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MQKRVALSFPEEVLEHVFSFIHLDKDRNSVSLVCKSWYEIERWCRRKVFIGNCYAVSPST
VIRRFPKVRSVELKGKPHFADFNLVPEGWGGYVYPWIEAMSSSYMWLEEIRLKRMVVSDE
CLELIAKSFKNFKVLVLSSCDGFSTDGLAAIASTCRNLKELDLRESDVDDVSGHWLSHFP
DTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEEL
GTGGYTAELRPDVYSALSVALSGCKDLKCLSGFWDAVPAYLPAVYSLCSRLTTLNLSYAT
VQSYDLVKLLSQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALT
EQGLVSVSMGCPKLESVLYFCRQMTNAALVTIARNRPNMTRFRLCIIEPKAPDYLTLEPL
DVGFGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGC
DSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDE
RGPPDSRPESCPVERVFIYRTVAGPRFDMPGFVWNMDQDSTMRFSREIITTNGL
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagcgagtagccttgtcgttcccagaagaggtactcgagcacgtgttttcgttt
atacacctggataaagataggaactcggtgtctctggtgtgcaagtcatggtacgagatc
gagcggtggtgccggagaaaagtgttcatcgggaactgttacgccgtgagtccatctacg
gtgataaggaggtttccgaaagtgagatccgtggagctgaaagggaaacctcactttgca
gactttaatttggtgcctgaaggatggggaggttacgtgtatccatggattgaagccatg
tcatcgtcgtacatgtggcttgaagagataaggctgaagaggatggtggtgagcgacgag
tgcttggagcttatagccaagtcgtttaagaattttaaggttcttgttctttcttcctgt
gatggcttctccaccgatggtctcgctgctatcgcttccacttgcaggaatcttaaagag
cttgatttgcgggagagtgatgttgatgatgttagtggccactggcttagccatttccct
gatacatatacttctttggtgtcgcttaatatctcttgcttagcatctgaggtcagtttc
tctgctctggaaaggctcgtcactaggtgtcccaatctcaagtctctcaagcttaaccgt
gctgtgcctcttgagaaactggctactttactacaacgagctcctcagttagaggaattg
ggcactggtgggtacactgctgaattgcgaccagatgtttactctgctttgtctgtggcg
ctttctggctgcaaggacttgaagtgcttatctggattttgggatgctgttcctgcctat
cttccagctgtttattctctttgcagtcgcctcactactttgaatttgagttatgcaact
gtccagagctatgatcttgtcaagcttcttagccaatgtcctaaactgcagcgcctctgg
gtgcttgactacatcgaggatgctggtctagaggtgcttgcttcaacctgcaaggaccta
cgcgagttaagagtgtttccgtctgagccttttgtcatggaaccaaacgtggcattaacc
gaacaggggcttgtctccgtctccatgggctgtccaaaactcgagtcagttctctacttt
tgccgtcaaatgaccaatgctgcattggtaaccattgctaggaaccgtcccaacatgact
cgcttccgtttgtgcatcattgagccgaaagcccccgactatctgactttagagcctctg
gatgttggatttggagccatagtagagcattgcaaagatctccgtcgcctctctttatca
ggcctcttgacagacaaggtttttgaatacattgggacatatgccaagaagatggaaatg
ctctcggtggcgtttgcaggagacagtgacttgggcatgcatcatgttttgtcagggtgc
gatagcctgaggaaactagagataagggactgcccgtttggagacaaggcgcttttggcc
aatgcttcaaagctggagacaatgcgatccctttggatgtcttcttgttccgtgagtttt
ggagcctgcaagttactaggacagaagatgccaaagctcaatgtggaagtcatcgatgaa
cggggtccaccagactcaagacccgagagctgccctgttgagagagtgtttatatacaga
acagtggctggtcctcggtttgacatgcctggcttcgtctggaacatggaccaagactca
acaatgaggttttccagggaaatcatcactactaacggattataa
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