KEGG   Camelina sativa (false flax): 104788697
Entry
104788697         CDS       T05044                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
csat  Camelina sativa (false flax)
Pathway
csat03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    104788697
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csat03021]
    104788697
Enzymes [BR:csat01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     104788697
Transcription machinery [BR:csat03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     104788697
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 CFAP77
Other DBs
NCBI-GeneID: 104788697
NCBI-ProteinID: XP_019083282
UniProt: A0ABM1Q944
LinkDB
Position
1:complement(12222339..12228428)
AA seq 1166 aa
MDIDDEIEAAGEINLSELGESFLQSFCKKAATSFFENYGLISHQLNSYDFFIKHGLQNVF
DSFGEMLVEPSFDITKKKADDWRYAIVRFGLVTVEMPTFFSDDKELQFLPWHARLQNMTY
SARIKVNVQVELFTKSVVKSDKFKTGQDEYVEKKILDVKKQDILIGRIPVMVKSVLCNTS
VKGKENCNKGDCAFDQGGYFVIKGAEKVFIAQEQMCTKRLWISNSPWTVSFRSETKRNRF
IVRLAENLKSEDYKRREKVLTVYFLSTEIPVWLMFFALGVSSDKEAMDLIAFDGDDANIT
NSLIASIHEADAICEAFRCGNNALAYVEQQIKSTKFPPLESVDDCLRLYLFPGLQGLKKK
ARFLGYMVKCLLSAYAGKRNCENRDSFRNKRIELAGELLEREIRVHLAHARRTMTKNMQK
HLAGDGDLKPIEHYLDASIITNGLTRAFSTGAWSHPFRKMERVSGVVANLGRANPLQTLI
DLRRTRQQVLYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNMSLLGLVSTQTLEPV
VEKLFDCGMEELMDDTSTPLCGKHKVLFNGDWIGLCSDSEYFVAELKSRRRRSELPREME
IKRDKDDNEVRIFTDAGRLLRPLLVVENLHKLKQDKPRQYSFEHLLDQGILELIGIEEEE
DCNTAWGIKQLLKEPNNYTHCELDLSFLLGVSCAIVPFANHDHGRRVLYQSQKHCQQAIG
FSSTNPNTRCDTLSQQLFYPQKPLFKTLASECLKKEVLFNGQNAIVAVNVHLGYNQEDSI
VMNKASLERGMFRSEQIRSYKSEVDSKDSEKRKKMDELVQFGKTHSKIGKVDSLDDDGFP
IIGANMSTGDIVIGRCTESGADHSIKLKHTERGIVQKVVLSSNDEGKNFAAVSLRQVRSP
CLGDKFSSMHGQKGVLGYVEEQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALSKG
IACPIQKKEGSSAAYTKLIRHATPFSTPSVSEITEQLHRAGFSRWGNERVYNGRTGEMMR
SLIFMGPTFYQRLVHMSEDKVKFRNTGPVHPLTRQPVAXDRKRFGGIKFGEMERDCLIAH
GASANLHERLFTLSDSSQMHICRKCKTYANVIERTPSSGRKIRGPYCRVCESSDHVVRVY
VPYGAKLLCQELFSMGITLNFDTKLC
NT seq 3501 nt   +upstreamnt  +downstreamnt
atggacattgatgatgagatcgaggctgctggggagatcaatctttctgagctaggagaa
agttttctccagagtttttgcaaaaaagctgcaacatccttctttgaaaactatggactt
ataagtcatcagctcaactcctacgacttcttcatcaaacacgggcttcagaatgtgttt
gattcctttggtgagatgctcgttgaaccgtcttttgatattacaaagaagaaggccgat
gattggagatacgctattgttcgattcggactagtcactgtcgagatgcccacattcttt
tctgatgacaaggagcttcagtttctcccatggcatgccaggcttcagaacatgacttac
tcagcaaggatcaaagtaaatgtccaagttgagctgttcacaaaaagtgttgttaaaagt
gacaaattcaagaccggacaagacgagtatgtcgagaagaagatactagatgttaaaaag
caggacattctaattggtagaatacctgtcatggtgaagtctgtcctttgcaatacaagc
gtgaaaggaaaggaaaactgcaataagggggattgtgcctttgatcagggtggatatttt
gtgataaagggtgctgagaaggtgtttatagctcaggaacagatgtgcacaaagagactg
tggatttctaattcaccatggacagtctccttcaggtccgaaactaaaagaaatcgattc
attgtgcgtctcgcagagaatctgaaatcagaagactataagagaagggagaaagtactg
acagtgtacttcttgtcgactgagattccagtctggctcatgttctttgcgctgggtgtt
tcgtcagacaaagaagccatggatttaattgctttcgatggtgatgatgcaaacattacc
aacagtctcatagcttctatccatgaagctgatgcaatttgtgaagcttttcgctgtggg
aacaatgctctagcatatgttgaacagcagattaaaagcaccaagttccctcctcttgaa
agtgtggatgactgcctccgcctgtatttgtttccaggcctccaaggtttgaagaagaaa
gcccgtttcctgggctatatggtgaagtgccttctcagcgcatatgcggggaaaagaaac
tgtgaaaacagggatagtttccggaacaagcgaattgagctcgctggagaactgttggag
cgggagataagggtgcatctggcacatgccagaagaaccatgaccaagaacatgcagaaa
cacctcgcaggggatggtgatttgaagcctattgagcattatttggatgcttccattatc
acaaatgggcttactagagccttctccactggagcatggtctcatcctttcaggaagatg
gaaagggtttcaggtgttgtagctaatctgggtcgtgcaaatccattgcagactctgatt
gatctgaggagaacgcgacagcaagtcctatataccggcaaggttggagatgctagatat
ccgcatccgtctcactggggcagagtatgctttttatcaactccagatggtgaaaattgt
ggtcttgtgaagaacatgtctcttcttggacttgttagcactcaaactttggagcctgtg
gtggaaaagctctttgattgtggaatggaagagctgatggatgataccagcacaccattg
tgtggcaaacataaagttcttttcaatggagactggattggattatgttcagattctgaa
tactttgtcgcggagttaaagagcaggcggcgccgaagtgaattacctcgtgagatggaa
attaaacgagataaagatgacaatgaggtgagaattttcactgacgctggtagactactc
cgacctctcttggttgtggaaaatctccacaagttgaagcaagacaaaccgagacagtat
tcttttgagcatcttcttgaccaagggattcttgagttgatcgggattgaagaagaagaa
gactgtaatacagcatggggaatcaaacagcttctgaaggaaccaaataattacacgcat
tgcgaattagacttgtcattcctgttgggtgtgagctgtgcaattgtcccatttgcaaac
cacgatcatgggagaagagttctctaccagtcccagaagcattgccaacaagccattggt
ttctcatcaacgaaccctaacacccgctgcgatacactgtcccagcagctgttctatccc
cagaagccacttttcaagacattggcgtcggagtgtcttaaaaaagaagtgctgtttaat
ggccagaacgcaattgttgctgtgaatgttcatctcgggtacaaccaagaggattccatt
gtgatgaacaaggcttcactggaacgtggtatgttccgttcagagcagattagaagctac
aaatcagaggttgatagcaaagactcggagaagaggaagaagatggatgagcttgttcag
tttggaaagacacacagcaaaatcggcaaagtagacagccttgatgatgacgggtttcct
atcattggtgctaacatgagcactggcgatattgtcattggcagatgcaccgagtctggg
gctgatcacagtataaagctcaagcacactgagagaggaattgtgcaaaaagtggtatta
tcatctaatgatgaggggaagaattttgctgcggtttctctgagacaggttcgttctcca
tgccttggagataagttttccagtatgcatgggcagaaaggtgttttaggctatgtagag
gaacaggagaattttccattcacgatccaaggcatagttcctgatattgtgataaacccg
cacgctttcccttctaggcaaacaccgggtcaactcttggaggctgctctctccaaagga
atcgcttgtcctatacaaaagaaggagggtagctctgctgcatacaccaaattgatacgt
catgctactcctttctccactccgagtgtcagtgaaatcactgagcagcttcacagggct
ggcttttcaagatgggggaacgaaagggtatacaacggtagaactggtgagatgatgcgt
tctctgatattcatgggcccaacgttctaccagcgacttgtccacatgtcagaggacaaa
gtcaagttcaggaacacaggaccagtccacccgctcacacggcaaccagtggcgncagat
aggaaaaggttcggcggaataaagtttggagaaatggagcgagactgcctaatagctcat
ggtgcttccgccaatttgcatgagcgtctcttcactctaagtgactcctctcagatgcac
atctgcagaaaatgcaagacatatgcgaatgtgatcgagaggactccaagcagtggaaga
aagatcagagggccttactgcagagtgtgcgaatcctcagaccatgtggttagggtgtat
gttccttatggagctaagcttctgtgtcaggagctgttcagcatgggcatcactctcaac
ttcgacaccaagctctgctag

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