Camelina sativa (false flax): 104788710
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Entry
104788710 CDS
T05044
Name
(RefSeq) piezo-type mechanosensitive ion channel homolog
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104788710
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csat04040
]
104788710
Membrane trafficking [BR:
csat04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
104788710
Ion channels [BR:
csat04040
]
Other channels
Mechanosensitive channel (Piezo)
104788710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_cap
Piezo_THU9_anchor
THU_Piezo1
Motif
Other DBs
NCBI-GeneID:
104788710
NCBI-ProteinID:
XP_010512797
LinkDB
All DBs
Position
5:53054..62665
Genome browser
AA seq
1837 aa
AA seq
DB search
FLIAMKPGFFHAVYVIFFLMYLLSHNINRKIRKSLILLCEVHFALLYILEIDLVSNSLKQ
KGSVSKEILFQLGLLRSESSWDFLEIALLACFCAIHNHGFEVLFSFSAIVRHTPSPPIGF
SILKAGLNKSVLLSVYSSPSSSYSLDNTTYERHIASFLSAIGQKFLSMYRSCGTYIAFIT
ILISVYLVKPNYVSFGYIFLLLLWVTGRQLFEETKRRLWFPLKAYAVLVFMFIYCLSSFV
SLQLWLSGFIDLYFYLGYDSKAPLLDNVWESLAVLIVMQLYSYERRQSGHYIPGQSRLLH
PGVFGFFERFLVWHGQKILFAALFYASLSPISVFGFVYLLGLVICTTFPKSSSIPSKSFL
IYTGFLVSAEYLFQLWDRRRILALKKERFETQKNLLKIYLKFWIENMFNLYGLEINMIAL
LLASFALLNAISMVYIALLAACVLLRRRLIQKLWPVVVFLFASILAIEYVATWNSFLPSD
QAPIETSVHCHDCWSIAALYFKFCRECWLGLRVDDPRTLISYFVVFMLACFKLRADHISS
FSESSTYHQMKSQRKNSFVWRDLSFETKSMWTVLDYLRLYCYVHLLDVVLILILITGTLE
YDILHLGYLAFALVFARMRLEILKKKNKIFRFLRVYNFVLIIFSLAYQSPFVGNFNDGKC
ETVDYIYEVIGFYKYDYGFRITARSALVEIIIFMLVSLQSYMFSSQEFDYVSRYLEAEQI
GAIVREQEKKAARKTEQLQQIREAEEKKRQRNLQVEKMKSEMLNLRVQLHRMNSDSNFGV
ASPRTEGLRRRKSPYLISDSGAASPEIDGVVHKKEEQLIDEDSLYPFEAHEFPMSTTPEA
PDSPQCSFGASPCEITEVQQDLDVMSMERERKEKSEGKENPLISAVQLIGDGVSQVQFIG
NQAVNNLVNFLNISPENSDTNEQSSVDDEVYDEMESQKRKHTPFERSTSLQSDRSSDGTS
FQIGRILRHIWSRMQSNNDIVCYCCFIIAFLWNFSLLSMVYLAALFLYALCVHTGPTHIF
WVIMLMYTEIYILLQYLYQIIIQHCGLSIDAPLLHELGFPTQRIKSSFVVSSLPLFLIYI
FTLIQSAITVKDGDWVPSADFTSRRNARGSQKDLTRISWSERIYDVFKKLRDSVKLVIRS
ICRYWISLTRGAESPPYFVQVTMDVHMWPEDGIQPERIECRMNQLLRLVHNERCEKGNPD
LCPYSSRVHVQSIERSTETPNEALVVLEVEYASPTNGCSSAEWYKSLTPASDVAKEIRKA
QHSGLVEGTGFPYPILSVIGGGKRETDLYAYIFGADLIVFFLVAIFYSSVIKNKSEFIDV
YQLEDQFPFDFVIILMVIFFLIVVDRVIYLCSFATGKVVYYLFSLILFTYAVTEYAWSIY
PTQQHAAGLALRLIFLAKAMSLALQAIQIRYGLPHKSTLYRQFLTSEVSRINYYGYRLYR
ALPFLYELRCVLDWSCTATSLTMYDWLKLEDVNASLYLVKCDTVLNRATHKHGEKQTKMT
KCCNGICLFFILLCVIWAPMLMYSSGNPTNIANPIKDASVQIDLKTVGGKLTLYQTTLCE
RISGDNIDLGLDLGSQSFLPTYNKNDIQLICCQADASVLWLVPDTVVTRFIQSLDWDTDM
DITFSWVLNRDRPKGKETVKYERSVDPLDLPKRSDIQMVLNGSMDGFRVHNLYPKFFRVT
GSGDVRSFEDQKDEVSADILMNHADFKWWWSFHNLKASENISACEGMDGPVAIIMSEETP
PQGFLGDTLSKFSIWGLYITFVLAVGRFIRLQCSDLRMRIPYENLPSCDRLIAICEDLYA
ARAEGELGVEEVLYWTLVKIYRSPHMLLEYTKLDYDA
NT seq
5514 nt
NT seq
+upstream
nt +downstream
nt
ttcctcattgccatgaaacctgggtttttccatgctgtgtatgttatattcttccttatg
tatctgttgagccataacatcaacagaaagatacgcaagtccttgattctactatgcgaa
gttcattttgcacttttgtacattcttgagatcgacctcgtgtcgaactccttaaagcag
aaaggctctgtgagcaaggaaattctatttcagttaggtctccttaggtctgaaagctcc
tgggacttcttggagatagccttgcttgcttgcttctgtgctatccataatcatggtttt
gaggtgttattttccttctcagcaattgtacggcatacaccaagtcctccaattggattt
agcatattgaaagctggtctcaacaaatcagtcctcttgtccgtctattcgtctccatct
tcaagttatagcctggataatactacttatgagagacatattgcttcatttctgagtgca
attgggcagaagtttctgtctatgtaccgatcatgtggaacatacattgctttcatcact
attctcataagtgtatacctggtcaaacccaattatgtatcatttgggtatattttcctt
ctcttgctctgggttactggaagacaactgtttgaagaaactaagagacgcttgtggttc
cctttgaaagcatacgcagttttggtgtttatgtttatctactgcttaagtagctttgtc
agcttgcagctttggttatctggattcattgatctctacttttatttgggttacgactcc
aaagcaccattgctggataatgtctgggaatctcttgctgtgttgatcgtgatgcaactt
tacagctatgaaaggaggcagagtggacactacattccaggtcaatctcgtttgcttcat
cctggagtttttggtttttttgagagatttttggtatggcatggtcagaagatcttgttc
gcggcattgttttacgcatcattgtctccgattagtgtgtttggatttgtatatctcctt
ggccttgtcatctgcacaaccttcccaaagtcttcttcaataccgtccaaatcatttttg
atttatactggatttttggtgtctgcggagtatcttttccaactgtgggataggaggagg
attcttgcattgaagaaggagaggtttgaaacacagaagaatctgttgaaaatttacttg
aagttttggatagagaatatgtttaatctctatggccttgagataaacatgattgcactg
cttcttgcgagttttgctttgctgaatgccatctccatggtatatattgcactgcttgct
gcatgtgtcctcttgagaagacgcctaattcagaaactatggcctgtcgttgtttttctg
tttgcatcaattctcgcaattgagtacgttgccacatggaatagctttttgccttcagat
caggccccaattgaaactagtgtgcattgccatgactgctggagtattgcagctctctac
tttaagttttgccgggagtgttggcttgggctgagagttgacgacccccggacacttatt
agctatttcgtggtattcatgcttgcctgtttcaaacttcgggctgatcacatatccagt
ttctcagagtcgtcgacatatcatcagatgaagtctcaaagaaagaactcatttgtctgg
agagatctctccttcgagacaaagagcatgtggactgtgcttgattacctgaggctttat
tgttacgtccatctgctggatgttgtactcattctgattctaatcacaggaactcttgag
tatgacattctacatctgggttatcttgcatttgcgcttgtttttgcccgaatgcgactg
gaaatactgaagaagaaaaacaaaatattcaggtttttgcgggtgtacaattttgttctc
atcatcttttctctcgcataccagtctccctttgttggaaacttcaatgatggaaaatgt
gaaacagttgattatatatacgaggtgattggattttacaagtatgactatggatttcga
atcactgcaagatctgctctcgttgagatcatcatatttatgctagtatctcttcagtcc
tacatgttttcctcccaggagtttgattatgtctcgcggtatcttgaagcagagcaaatc
ggtgctattgtgcgggagcaagagaagaaagcagcacggaagaccgagcaactgcaacaa
attcgtgaggctgaggaaaaaaaacggcagcggaatttgcaggtggaaaagatgaaatct
gaaatgctgaacctgcgggtacagcttcacagaatgaattctgattctaattttggagtt
gcttctccgcgcactgaaggtctaagaaggagaaagagtccgtatcttatttcagatagt
ggcgcagccagtcctgagattgacggagtggtccacaagaaagaagagcagcttattgac
gaggattcactgtatccttttgaagctcatgagtttcctatgagtaccactccagaagca
ccagattctccacagtgttcatttggagcatctccttgtgagataactgaagttcaacag
gatcttgatgtgatgtctatggaacgtgaaagaaaggaaaagtctgaaggaaaggagaat
ccgttgatttctgcggtgcaactcatcggtgatggtgtttctcaggtacaatttattgga
aatcaggcagtaaataaccttgtgaatttcttaaacatctcaccggaaaattcagataca
aatgagcagtcctctgttgatgatgaggtgtatgatgagatggaaagtcagaaaagaaaa
cacacaccttttgaacggtcaacatctctacagtctgacaggagtagtgatggcactagc
tttcagataggaaggatccttcgacatatttggtctaggatgcagtccaataacgatatt
gtctgctactgctgcttcattattgcgtttctgtggaacttcagtctgctttccatggtc
tatctagcagcactgttcctatatgccctctgcgttcacactggtcctactcacatcttc
tgggtcatcatgctaatgtacacagaaatttatatcctgctccagtatttataccagatt
ataatccagcactgtggtttaagcattgatgcacctcttcttcatgaattgggatttcca
acgcaaagaatcaaatcatcatttgttgtcagctcgttgcctctgttccttatttacatc
tttacgctcatacagagtgctataacagtaaaggatggtgattgggttccttctgcagat
tttacttcacgccggaatgcccgtggtagccagaaggatcttacaagaattagctggagc
gagagaatctatgatgtgttcaagaagctaagagatagtgtcaaattggtgatcagaagc
atctgccgatattggatatctctgacacgtggagcagaatcccctccttactttgttcag
gtgacaatggatgttcacatgtggcctgaagatggaattcagcctgaaagaattgaatgt
agaatgaatcagttgcttaggcttgttcataatgagagatgcgagaagggaaaccctgat
ctctgcccttactctagcagggttcatgtacaaagtatagagaggagtacagagacccca
aacgaggccttagttgttctagaggttgagtatgcttctcccacgaatgggtgttcttct
gcagaatggtacaaatcacttaccccagcctctgatgtggcgaaagaaattcgtaaagct
caacatagtggacttgttgaaggaactggatttccttaccccattctctctgtgattggt
ggaggaaagagagaaactgacctctatgcctacatatttggtgctgatctgatcgtcttc
tttctggttgccattttctactcatcagtcataaaaaataaaagcgagtttattgatgta
tatcagctagaagaccagttcccatttgactttgtcattatattaatggttatcttcttc
ctaattgttgttgatcgggtcatctatctttgctcatttgcgactggaaaagtggtatac
tatctcttcagtcttattctcttcacgtatgcagttacagagtatgcttggagcatatat
cctacccagcaacacgctgctggcttggccctcagattgatatttcttgccaaagcaatg
tcgctagctctccaggccatacaaatccgctatggactacctcataaaagcaccttgtat
cggcagtttttgacaagtgaagtttcacggatcaattactatggttacagactttaccgt
gctcttcctttcctgtatgaattgagatgtgtacttgactggtcttgcacagccacatca
ctgacaatgtatgactggctcaagttggaagatgtaaatgcgagtttgtaccttgtcaaa
tgcgatacagttttaaatcgagcaacacataaacatggggagaaacaaacaaaaatgact
aaatgctgcaacgggatatgtctgttcttcatcttgttatgtgttatctgggctcctatg
ctgatgtatagcagtggtaatccaacaaacattgccaatcctataaaagatgcgagcgtt
cagattgatttgaaaacagtcggcggaaagcttactttgtaccaaacaaccttatgcgag
agaatctcaggggataacattgatctcgggctagatctcggatcccaaagcttcttgcca
acatacaacaaaaatgacatccagctgatatgctgccaagctgatgcaagtgttttatgg
cttgtccctgacacagttgtgaccagatttattcagtcccttgactgggacacagatatg
gacatcaccttttcatgggttcttaacagagaccgacccaaaggcaaagaaactgtaaaa
tatgaaagaagtgtcgaccctctggaccttccaaaacgctctgatatacaaatggttctc
aacggatcaatggatggatttagagtgcataatttgtacccaaagttcttccgtgttacc
ggttctggcgatgtcaggtctttcgaggatcagaaggatgaagtgagtgcagacatactc
atgaaccatgcagatttcaagtggtggtggtcattccataatcttaaagcttctgaaaat
atcagcgcttgcgagggtatggacggaccagttgctatcataatgtctgaggaaacaccc
ccacagggctttctgggtgacaccctcagcaaattcagtatatggggactctatataaca
tttgtactagccgtagggcgattcatcaggcttcagtgctctgacctgcgtatgagaata
ccttacgagaacttgccttcgtgtgacagattaatagccatatgcgaggatttatatgcg
gcaagagcagagggtgagcttggagtagaagaagttctatactggacgcttgtgaagata
tatagatccccgcacatgctgcttgagtatacaaagctagactacgatgcttag
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