Camelina sativa (false flax): 104788827
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Entry
104788827 CDS
T05044
Name
(RefSeq) nuclear pore complex protein NUP93A-like
KO
K14309
nuclear pore complex protein Nup93
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104788827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104788827
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104788827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
104788827
NCBI-ProteinID:
XP_019100726
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All DBs
Position
5:3281965..3285362
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AA seq
487 aa
AA seq
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MANDQEMSGWTDLLHSSSKLLEQAAPSSQFPPLQRNLDQLEALSKKLKAKTLRNEAPSQS
IAATRLLAREGINAEQLARDLKSFELKTTFEDVFPAEATSVEEYLQQVHEMAMVSAIQEA
QKDNVRSFNDYMMKVLEEDWRKEKRDFLQSLSRISMLPKTNFTDTSREAHAGQLVPVASS
PRVSSIPGKELVALANIPIHEKKAYIYGEVVKKLNTSKERGLPFRPAMCFKDAYDTLGAE
VTRGKSVNMQKIWQLVQAITGEDSATRQGVSKRMSLAIGARLHLQRGHEKFIMDTIQSHP
SQAALGGSVGNLQRIRAFLRIRLRDYGILDFDSADARRQPPVDTTWQQIYFCLRTGYYEE
AREIARSTRSSQQFAPLLTEWITTDGMVAAESAAIASEECEKMLRMGDRLGRTSYDKKKL
LLYTIISGSRRQIERILRDLSTLFNTIEDFLWFKLSCIRDVTGGSSSVHSVATSYHALIQ
RSRRWRV
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaccaagagatgagtggttggactgatcttctccattcttcgtcgaagctt
ctggagcaagctgctccttcttctcagtttcctcctcttcagagaaatttagatcagttg
gaagcgttatcgaagaagctaaaggctaaaaccctaaggaacgaagctccttctcagtct
attgctgccactagactactcgcacgggagggaatcaatgcagagcaactagctcgtgat
cttaaatcttttgagctcaagacaacatttgaggatgtgtttcctgctgaggcgacgagc
gttgaagaatacctgcaacaggttcatgaaatggctatggtatcagctatacaggaagcc
caaaaggataatgttcgaagctttaatgactacatgatgaaagtgctggaggaggattgg
agaaaagaaaaacgcgacttccttcagagcctcagcagaatatcaatgctacctaaaacg
aatttcactgatacaagcagagaggctcatgctggtcaactagtgccggtggcttcaagt
cctcgagtgtcctcaataccaggcaaagaacttgtggctctggctaacatacccattcat
gagaaaaaggcatacatctatggagaggttgtgaagaaacttaacacttcaaaagaacga
ggcttgccatttagacctgctatgtgttttaaggacgcttatgatactcttggtgctgag
gtaactcgcggaaaatcagtcaacatgcagaaaatctggcagcttgtccaggcaataaca
ggtgaagattcagcaactagacaaggtgtttcgaagaggatgtctctcgcgataggtgca
aggcttcatttacaacgtgggcatgagaaatttataatggacacaattcagagtcacccg
tcacaagctgctcttggtggatctgttggaaatttgcaaagaattcgtgcattccttcgg
attcgtttgagagactatggtattttagatttcgattcagctgatgctcgtaggcagcct
cctgttgatactacttggcaacagatatatttttgcttgcgaactgggtattatgaggag
gctagagaaatcgctcggtcaactcggtcatctcagcaatttgcaccactgcttacagag
tggattaccacagatggtatggtggctgcagagtctgcagctatagcttcagaagaatgt
gagaaaatgctaagaatgggtgaccggttgggtcgaacttcgtatgacaagaagaaactt
ttactctacaccatcatttctggctcccgtaggcaaattgagcgcatactgagggatctg
tctacactattcaacacaattgaagatttcttatggttcaaattatcatgcataagggac
gtcactggtggatcttcatctgtgcattcagttgctaccagctatcatgcacttatccaa
agaagcaggagatggagggtataa
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