Camelina sativa (false flax): 104789377
Help
Entry
104789377 CDS
T05044
Name
(RefSeq) SNF2 domain-containing protein CLASSY 4-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104789377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104789377
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
104789377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
SNF2-rel_dom
ResIII
Helicase_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
104789377
NCBI-ProteinID:
XP_010513389
LinkDB
All DBs
Position
1:complement(13049156..13053031)
Genome browser
AA seq
1091 aa
AA seq
DB search
MDMTTCVARRTRSRTESYLNSILNKSKGISESEATLNSRTGNKRGVSLRDTCSPSPRKKK
PRRRKVSEDDNNDDDGDVEFVRTDYRKREGVDGDNVGSNSVGLESKSLDCGDRVCDFDLD
DDVVFVGTIPRENEHDVEGDNVGSPRVCVDDEKGSSLNPLSPDGDVVFIRTIPGEKEHVE
DGNVGSRVCDILLDDINLKGEEKFSDVEGGSVEELGTDSGDEVSGQDRDSDGEDADSDSS
DYVVESSDSSYVDSSDGDFVCSEDEEGETRDVAAKEKKSPSEKVRYHKKSRTSRRENNLN
VFQLLAKSIWDGKKVFEEDICSGDETVDVDCREDAIVRESSSEKVNEEQGKPRRPRSFHR
VKEKNHLKGESFVDGEKLCDGQETIHCSTEDSPPLILRFGCEEPVLIEKTDEEKELDSLW
EDMAVALTLEGMDSSTPAKVGDMLCSKERHDFVLEEEIGLICRHCSHVAVEIKDISPAMD
KYRANISDNKKCSEKKGDPLFNRLEFDASDHSSYPASLDNTEGTVWQYVPGIRDTLYPHQ
QEGFEFIWKNLAGTTKLDEFNSVGVKGSGGCIISHKAGTGKTRLTIVFLQSYLERFPDSH
PVVIAPATLMRTWEEECRKWNADIPFFNMNSRQFSGYEDASAVARLNGNRQHNSVRMVKL
YSWWNKKSILGVSYPLYEKLAADKNAGEMQVFRRMLLELPGLLVLDEGHTPRNQNSLIWK
VLTEVRTEKRIILSGTLFQNNFKELSNVLCLARPALKDTLSSMLQELSKRSQEGEHGRVN
EEIGIVDLKVKIAPFVHVHEGNILEESLPGLKDCVVVLNPPFQQKKILDRIDTSQNTFEF
EHKLSAVSVHPSLYLCCNPTKKEDLVIGPATLGTLKRLRLDYKEGVKTKFLINFIRITEK
VKEKVLVYSQYIDTLKLIMEQLSAEFSWTEGEEILLMHGKVEQRERQQLINNFNKQDSKS
KVLLASTKACSEGISLVGASRVVFLDVVWNPSVESQAISRAYRIGQKRAVFVYHLMVKDT
SEWDKYCKQSEKYRISELVFSSTNEKDKPINNEAVSEDRILDEMVRLNKLKDIFEKILYN
PKESDMFTSIF
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggatatgactacttgtgttgctagaagaacccgttcgaggactgaatcttacttgaac
tcgattctgaataaatcaaaggggatttctgagtctgaggctacgttaaattctaggacg
gggaataagagaggagtgagcttgcgcgatacttgttcaccgtctccgaggaagaagaaa
ccgcggcggaggaaggtgagtgaggatgataacaacgacgacgacggcgatgttgaattt
gtcagaactgattatcgtaagcgagaaggtgtggatggtgataacgttggttctaattct
gtgggtttggaatcgaaatcgcttgattgtggtgatagggtttgtgattttgatttggat
gatgatgttgtttttgttgggactatccctagagagaatgagcatgatgtagagggtgac
aatgttggttctcctagggtatgtgtggatgatgagaaaggttctagtttgaatccttta
tctccggatggggatgttgtttttataaggactatccctggagagaaggaacatgtcgag
gatggcaatgttggttctagggtttgtgatattcttctggatgatattaatttgaagggt
gaggagaagttttctgatgtggaaggaggttctgtggaggaattagggacggattcaggt
gacgaagttagtggtcaagatagagatagtgatggtgaagatgctgattctgactcatct
gattacgtggtggaaagttcagattcttcttatgtagatagctctgatggtgatttcgtt
tgttctgaggatgaagagggtgaaaccagagatgttgctgctaaagagaaaaagagccca
agtgaaaaagtacgctaccataagaagtcgaggacttctcgtagggagaataacttgaat
gtatttcagctgctagctaaatctatttgggatggaaagaaagttttcgaggaagatatc
tgctctggggacgaaaccgtggacgttgattgtagagaagatgctatagtaagggagagc
tcaagtgaaaaggtaaatgaagaacaggggaaaccaaggagaccgaggagtttccatagg
gtgaaggagaagaaccacttgaagggtgagagctttgttgatggcgaaaaactatgtgat
ggacaagagacaatacactgctcgacagaagattcacctcctttaatcttgagatttggc
tgcgaggagccggtgcttattgagaagacagatgaggagaaagaattagacagtttgtgg
gaagatatggccgttgctctaacattggaaggaatggactcatctactcctgctaaagtt
ggtgatatgttatgtagcaaagagaggcacgactttgtgctggaggaggaaattggtttg
atatgccgccactgttctcatgtggccgtcgagatcaaagacatctcaccagctatggac
aagtatcgtgctaatatcagtgacaataagaaatgtagtgagaaaaagggtgacccttta
tttaataggcttgagtttgatgcttcagatcacagcagttatcccgcctctttggataat
acagaaggaactgtctggcaatacgtccctggcatcagagatactttgtacccacaccaa
caagaaggctttgaatttatttggaagaacttagctgggacaacaaaacttgatgagttt
aacagcgtaggggttaagggaagcggtggatgcattatttctcataaggctggaactggt
aagacacgcttgaccatcgtttttcttcagtcgtatctagaacggtttccagatagccat
cctgtggtcatagctcctgcaactctaatgcgtacgtgggaagaagaatgcaggaaatgg
aacgcagatattccattttttaacatgaatagtcggcagttctcagggtatgaggacgct
tcagctgtcgcacgtttaaatggaaacaggcagcataattccgtccgtatggttaagtta
tattcgtggtggaataagaaaagcattcttggagttagctaccctctgtatgagaagctc
gcggcagataagaacgctggagaaatgcaagtgtttaggaggatgttgctagagttgccg
gggttgctggtccttgacgagggccacaccccgagaaaccagaatagtctcatttggaaa
gtgcttactgaagtcagaacagaaaagcgtataattctttcagggacactgttccagaat
aatttcaaggaactttcaaatgtcttatgcctggcaagaccagctttgaaagatacgctt
tcgtcgatgctacaggaacttagcaagcggagccaagaaggagaacacggaagggtgaat
gaagaaattggaattgtggatcttaaggttaagattgctccttttgtgcatgtccacgaa
ggaaacatccttgaagaaagccttccaggtctaaaagactgtgttgtggtgttgaacccg
ccttttcaacagaagaaaattctggacagaattgatacttctcaaaacacatttgaattt
gagcacaagctttcagctgtttcagtacacccatctctgtatttgtgctgcaatccgaca
aagaaggaagacttggttattgggccagcaacattaggaactctgaagaggcttagactt
gactataaggaaggtgtgaaaacaaagttccttatcaacttcatccgcatcactgaaaaa
gtgaaagagaaagtgttggtgtatagccaatacattgacactctaaagctgatcatggag
cagctcagtgcagaatttagctggactgaaggggaagaaattctcttaatgcatggtaaa
gttgaacaaagagagaggcagcaattgatcaacaacttcaacaaacaagacagtaaatct
aaagttctactggcatcaacaaaagcatgttctgagggtatcagtcttgttggcgcttca
agagttgtgtttcttgatgttgtttggaacccttctgttgaaagccaagccataagtcga
gcttacagaattggtcaaaagcgggctgtgttcgtttaccatctcatggttaaagataca
tctgagtgggacaagtactgtaagcaaagtgagaaatatcgcatatctgaactggtcttc
tcttctaccaatgagaaggataagccgattaacaacgaagctgtttctgaagatagaatc
ctcgacgagatggttcgactcaataagctgaaagacatctttgagaagatactttataat
ccaaaggagtctgacatgtttaccagcatcttctga
DBGET
integrated database retrieval system
