Camelina sativa (false flax): 104789389
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Entry
104789389 CDS
T05044
Name
(RefSeq) probable pectate lyase 7
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104789389
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104789389
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
VP4_2
Motif
Other DBs
NCBI-GeneID:
104789389
NCBI-ProteinID:
XP_010513594
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Position
1:116358..118652
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AA seq
473 aa
AA seq
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METARLVKLVCVICIASLIPTILANVAETDEYWVNKANEARKHTLMAYHPDPYDIVDHFH
ERHYDNSTDVEGTEEDKAVDSTEDEDVIEMTSSPTNSTRRSLSGKRRGRGKWSKLKGPCT
ASNPIDKCWRCQPDWARRRKRLVRCVRGFGYRTTGGKRGRIYVVTSPRDDDTVNPRPGTL
RHAVIQKEPLWIIFKHDMSIRLSQELMIASHKTIDARGANVHIAYGAGITMQYVHNIIIH
GLHVHHIVSSSGGLIRDSIDHFGQRGQADGDGISIFGATNIWLDHISMSKCQDGLIDAIM
GSTAITISNSHFTHHNDVMLLGAQDHNQDDKKMQVTVAYNHFGKGLVQRMPRIRWGFVHV
VNNDYTHWELYAIGGSQGPTILSHGNRFIAPPHKQHYREVTKRDYAPEAEWKNWNWRSEK
DYFLNGAYFRQSGNPHFKCSHSRQQMIKPKHGVAVSKLTKYAGALDCRVGKAC
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggagacggctaggcttgtgaagttagtgtgtgtgatttgtattgccagtttgattccg
accatacttgccaatgttgccgagaccgatgagtattgggtaaataaggccaatgaagct
cgtaaacatacccttatggcttatcatcctgatccttatgacatcgtcgaccacttccac
gagcgtcattacgacaactcgactgatgtcgaggggaccgaggaagacaaggcggtcgat
tccacggaagatgaggacgtcattgagatgacttctagtccgacaaacagcacaaggcgg
agcctaagtggcaagcgcaggggaagaggaaaatggagcaagctaaagggaccttgcacc
gcaagcaacccgattgataaatgctggcgttgccaacccgattgggccaggcgccgtaag
aggcttgttcgttgcgtccgtgggtttggttacaggaccacaggaggcaagcgcggtcgc
atctatgtggtcacgagccccagagacgatgatacggtgaaccctagacccggaacacta
cgtcacgctgtgatacaaaaagaaccgctatggatcattttcaagcacgatatgagcatc
aggttaagccaagagctaatgattgctagtcacaagacgatcgatgctcgtggcgctaac
gtgcacatcgcatatggtgccggtatcacgatgcagtacgtgcacaatatcatcatccat
gggcttcacgtccatcacattgtgtcaagcagtggcggtttgataagagattcgattgac
cactttgggcaaagaggacaggctgatggagatgggatctctatctttggggcaacaaac
atttggcttgaccacatttctatgtctaaatgccaagatggccttattgacgctattatg
ggctccaccgcaatcaccatctctaactctcatttcacccaccacaacgatgtgatgttg
ctcggtgcacaagaccacaaccaggatgacaagaagatgcaagtcacagtggcttacaac
cattttggtaaaggactcgtacagaggatgcctaggatccgatggggtttcgtccatgtt
gtcaacaatgactacactcattgggagctttacgcgattggaggtagccaaggtcctacc
attctcagccatggaaaccgtttcatcgctcctcctcacaaacaacattacagagaggtg
acaaagagggattatgctccagaagctgaatggaaaaactggaactggagatccgagaaa
gattatttcttgaacggagcatatttcagacaatctggaaatcctcatttcaagtgctcg
cactcaaggcaacagatgataaaacccaaacatggtgtggccgtttcaaagcttacaaaa
tacgccggagcattggattgtcgggtcggaaaagcatgctaa
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