Camelina sativa (false flax): 104789546
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Entry
104789546 CDS
T05044
Name
(RefSeq) transcription elongation factor SPT6 homolog
KO
K11292
transcription elongation factor SPT6
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104789546
03036 Chromosome and associated proteins [BR:
csat03036
]
104789546
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
104789546
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
104789546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPT6_acidic
Tex_central_region
HTH_44
YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
104789546
NCBI-ProteinID:
XP_010513528
UniProt:
A0ABM0ZBZ4
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Position
5:complement(24473856..24480508)
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AA seq
824 aa
AA seq
DB search
MPRNAISDDEDDHELEDEDGEPVQGDEHGDNDDEEDDDDDVGNEYENDGFIVDDEDEEEE
QEEDDGRQDSDEERQKKKKRRRKKDEDLDEDDYLLLQDNNVNIQKRKYKRLKKAQREREN
GQGGSSDDEFAGSGGARRSAEDKIKDRLFDDIDDPPDDVGDEEDLVVEEDVVGSDDEMAD
FIVDEDDGLGHPKRGGLKKKKFRQGSDISAMRDANEIFGDVDELLTIRKKGLASSERMER
RLEDEFEPTVLSEKYMTGQDDEIRQLDIPERMQISEESTGSPPVDELSIEEESNWIYAQF
TSLLKESDGQGVHSFEGRGFSVNRDDIAKFLELHHVQKLEIPFIAMYRKEQCRSLLDTAD
VDGANQDKKPETKWHKVFWMIQDLDKKWLLLRKRKMALHGYYTKRYEEESRRVYDETRLN
LNQYLFESVIKSLNVAETEREVDDVDSKFNLHFPPGEIGVDEGQYKRPKRKSQYSICSKA
GLWEVANKFGYSAEQLGLALSLEKLVDELEDAKETPEEMAMNFVCAMFEDPQAVLKGARH
MAAVEISCEPSVKKYVRGIYMENAVVSTSPTADGNTVIDSFHQFSGIKWLREKPLSKFEG
AQWLLIQKAEEEKLLQVTFKLPENHMNRLISDCNEHYLSVGVSKYAQLWNEQRKLILEDA
LHTFLLPSMEKEARSLLTSRAKSRLLLEYGQALWNKVSAGPYQKKEMDISSDEEVAPRVM
ACCWGPGKPPNTFVMLDSSGEVLDVLYAGSLTLRSQNVNDQQRKKNDQDRVLKFMMDHQP
HVVALGAVNLSCTRLKDDIYEVIFQMVEEKPRDVGHGMDDLSCS
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggaacgcgatttctgacgatgaagatgatcatgagctcgaggatgaggacgga
gagccagttcagggagatgaacacggtgataacgatgatgaagaagatgatgatgatgac
gttgggaatgagtatgagaatgatgggttcatagttgatgatgaagacgaggaagaagaa
caagaagaggacgacggaaggcaagatagcgatgaggaaaggcagaaaaagaagaagagg
cgaagaaaaaaggacgaagatcttgatgaagatgattatctgcttctccaagataacaat
gtcaatatccaaaagaggaagtataagcggttgaaaaaagctcaaagggaaagggaaaat
ggtcaggggggatcatctgatgatgagtttgctgggagtggtggagctagaagaagtgct
gaggataagatcaaagacaggctgtttgatgatatcgatgatccacctgatgatgtaggc
gatgaggaagacctagttgtggaagaagatgtagttgggagcgatgatgaaatggcagat
tttattgtagatgaagatgatgggcttggtcatcctaagaggggaggcttaaagaaaaag
aaatttaggcagggatcagatattagtgctatgcgagatgctaatgaaatatttggtgat
gttgatgaacttttgactattcgcaaaaagggtttggcatctagtgaaagaatggaaaga
aggctcgaagatgagtttgaaccaactgttctctctgagaagtacatgacagggcaagat
gatgaaatccgccagcttgatattcctgagagaatgcagatatctgaagaaagcactgga
agccctcctgtagatgagcttagcattgaggaagagagtaattggatatatgcccaattt
acttctctacttaaagaatctgatggacaaggtgttcatagtttcgaagggcgaggtttc
tcggttaacagggatgacattgcaaaatttttggagctacatcatgtgcagaagttagag
ataccgtttatagctatgtaccgaaaggagcaatgccggagcttgttggacactgctgat
gttgatggtgccaatcaagacaagaaacctgagactaagtggcataaggtcttctggatg
attcaggacttggataagaaatggctccttcttcgaaaaaggaaaatggcgttgcatggt
tactatacaaaacgttacgaagaagagtctaggagggtctatgacgaaactaggcttaat
ctaaatcagtatctttttgaatcagtcattaagtctcttaacgttgcagaaacagaaaga
gaagttgacgatgtagattccaagttcaacttgcattttcctcccggtgaaattggtgtt
gatgaagggcagtacaagagaccgaaaagaaaatcacaatatagcatctgtagcaaagct
gggctctgggaggttgccaacaaatttgggtatagtgctgagcaattgggacttgcattg
tccctcgaaaaattggttgacgagcttgaggacgcaaaggaaacaccagaggagatggca
atgaactttgtgtgcgcaatgtttgaagaccctcaagctgttctgaagggtgcacggcat
atggctgcagttgagataagttgcgagccatcagtcaaaaagtatgtccgtggcatttat
atggagaatgcagtagtctcaacaagtccaacagcagatggaaatacagtaatagattca
ttccatcagttttctgggatcaagtggttacgcgaaaagccattgagcaagtttgagggt
gcacaatggcttctcattcagaaggcagaagaggagaaacttcttcaagtaaccttcaag
ctgcctgagaatcacatgaataggctaattagcgactgcaatgaacattatctaagtgtc
ggtgttagtaagtatgctcaactctggaatgagcaaagaaagttaattctggaggatgca
cttcatacttttcttttgccatcaatggagaaagaagcaagatccttgctgactagcaga
gcgaagagtcggttgcttttagagtatggacaggctttgtggaacaaagtttctgcaggg
ccatatcaaaagaaagaaatggacattagctcagatgaggaagttgcgcctagggtcatg
gcatgttgttggggacctggaaagccaccaaatacgtttgtgatgctggattcatcggga
gaggtgcttgatgtactctatgctggatccctcacattacgatctcaaaatgtcaacgac
cagcaacgtaaaaagaatgaccaggatcgtgttttaaagtttatgatggaccaccaaccg
catgttgtggctttaggagctgtcaatttgtcttgtactcgtctgaaggatgatatttat
gaggtcatattccagatggtggaggaaaagcctagagatgttggacatggaatggatgat
ttaagctgcagttga
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