Camelina sativa (false flax): 104789583
Help
Entry
104789583 CDS
T05044
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104789583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104789583
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104789583
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
104789583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
104789583
NCBI-ProteinID:
XP_019100921
LinkDB
All DBs
Position
5:complement(25704162..25705850)
Genome browser
AA seq
413 aa
AA seq
DB search
MVKGTNSQQALAREASCSCQKRQPVPSTVQDEGDNGGGEVVARRSGTLFELDLLNCPVCC
HALTVPIFQCDNGHIACSSCCNKLGNKCPNYNCKWLSFPIGNYRCRIMERVVEAVIVPSP
NAKHGCTDKGEEEEEEGENGDVDGDVVIWEAQSGMLFDLHLLDCPVCSNALTSPIFQCDN
GHIACSSCCTELRYKCHSCIFPIGNYPCRIMEKVVQAIFVPCPNLKHGCTERFSYGKDLI
HEKKCVFAMCYCPQPNCNYRGVCNDLYIHYNANHLNKKISNQFVCDRSTVTWMKISDKIL
VFQESADGHGPLVAVQCFKEPEGLYVTVNCIAPSAPGVGEFSYDLSYSTPMSGDQHTMTF
KSPEMKRIQKVSFQTPEKDFMLVPYYFQDKRVSLKMNICIHRLKKDERGISIR
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaggcacgaactctcagcaagccctcgcccgagaagcatcgtgtagctgtcaa
aagaggcaaccagttccctccactgtccaagatgaaggcgataatggtggaggagaagtg
gtagcacgacgatcggggacgttgttcgagcttgatctcctcaattgtcctgtttgttgt
cacgcgctcaccgttcctatttttcagtgtgacaatggacatatagcttgttcttcttgc
tgtaataaactggggaacaaatgccctaattacaattgtaagtggctgtcttttccaatt
ggtaactatcgatgccgaataatggagagagttgttgaggcagtcattgtcccatctcca
aacgctaaacatggctgcaccgataaaggagaagaagaagaagaagaaggagagaatggt
gacgtagacggtgatgtggtgatatgggaggcacaatcgggaatgttgttcgatcttcat
cttcttgattgtccggtttgttctaacgcactcacgagtcctatctttcagtgtgacaat
ggacatatagcttgctctagttgctgtactgaactgaggtacaaatgccattcatgcatt
tttccaattggtaactacccatgcagaataatggagaaagttgtccaagcaatctttgtc
ccatgcccaaacctcaaacatggctgcaccgagagattctcttatggcaaagatttaata
catgagaagaaatgtgttttcgctatgtgctactgtccccagccgaactgcaattacaga
ggcgtatgcaatgatctctacattcattacaatgctaaccacctgaacaagaagatatca
aatcaattcgtttgtgaccgttccaccgtcacatggatgaagataagtgataagatttta
gtatttcaggaatctgcagatggtcatggtccgttggttgcagttcaatgtttcaaggag
ccagaaggattgtatgtgactgtgaactgtatagcaccttctgctccaggagttggggaa
ttttcctatgatctctcgtacagcacgccgatgtcaggcgaccaacacactatgacgttt
aaatcaccagagatgaagagaattcaaaaagtgagcttccaaactcctgagaaggacttc
atgttggtcccttactatttccaggataagagagtttcattgaagatgaatatttgcatc
caccgtttaaaaaaggatgaaagaggaatctcaataagatga
DBGET
integrated database retrieval system
