Camelina sativa (false flax): 104789709
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Entry
104789709 CDS
T05044
Name
(RefSeq) probable pectate lyase 10
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104789709
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104789709
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Defensin_propep
Motif
Other DBs
NCBI-GeneID:
104789709
NCBI-ProteinID:
XP_010513666
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Position
1:complement(13427609..13430477)
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AA seq
442 aa
AA seq
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MAVFFSSRSFLALLATLIILALCVNASTIANETEELKSHSSSNSSTVDKLSNDDGAWNEH
AVKNPEEVAAMVDMTIKNSTERRRLGFFSCATGNPIDDCWRCDRNWHLRRKRLANCAIGF
GRNAVGGRDGRYYVVTDPSDHDAVNPRPGTLRHAVIQDRPLWIVFKRDMVITLSQELIMN
SFKTIDGRGVNVAIAGGACITIQFVTNIIIHGINIHDCRRTGNAMVRSSPSHYGWRTMAD
GDAISIFGSSHIWIDHNSLSNCADGLVDAIMGSTAITISNNYMTHHNEVMLMGHSDSYTR
DKMMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSANPTINSQGNRFL
APGNPFAKEVTKRVGSWQGEWKQWNWRSQGDQMLNGAYFTRSGAAAPASYARASSLGAKP
ASVVRMLTYSSGALKCRYGMRC
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcttctttagcagcagaagcttcttagctctcttagcaactctaatcattcta
gcattatgtgtgaatgcatcaacaatagctaacgaaacagaggagctcaagtcgcatagc
tcaagtaattcatcgacggttgataagttatctaacgatgacggtgcatggaacgaacat
gccgttaaaaacccagaagaagtagctgcaatggtcgatatgacgattaagaacagtaca
gagcggaggaggttaggattcttctcatgcgccaccgggaacccaatcgacgactgttgg
agatgtgaccggaactggcacctccgtcgtaagcgtctcgcgaactgcgcgatcggattc
ggtcgtaacgcagtcggaggacgcgatggtcgttactacgtcgtcacagatccgtcagac
cacgacgcggttaatcctcgaccgggaacgctccgtcacgccgtgatccaagaccgtccg
ctatggatcgtgttcaaacgcgacatggtgataactctgagccaggagctaatcatgaac
agcttcaaaacgatcgatggtcgtggcgtgaacgtcgcgatcgccggcggtgcttgtatc
acgatccagtttgtgacgaacattatcatccacgggattaatatacatgattgtagaagg
actggtaacgctatggttcgtagctcgccgtcgcattacgggtggaggactatggcggat
ggtgatgcgatttcgatttttggatcgagtcatatttggattgatcacaattcgttgtct
aattgtgctgatggattggttgatgcgattatgggatctactgctattactatctctaat
aactatatgactcaccacaacgaggttatgttgatggggcatagtgattcatacaccaga
gacaagatgatgcaagtgaccatagcatataaccattttggggaagggcttatacagaga
atgccgaggtgtagacatggttatttccatgttgtaaacaatgattacactcactgggta
atgtatgcaattggtggaagtgctaaccctaccattaacagccaaggcaatcggttcctt
gcccctggtaacccttttgccaaagaggtgacgaagagggtaggttcatggcaaggggaa
tggaagcaatggaactggagatcacagggagaccaaatgctcaacggtgcctacttcact
agatctggagctgctgctcctgcaagctatgccagagcatctagcttgggagctaaacca
gcttccgttgtaagaatgcttacctacagctccggtgcccttaaatgcaggtatggtatg
cggtgttag
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