Camelina sativa (false flax): 104789873
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Entry
104789873 CDS
T05044
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104789873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104789873
03012 Translation factors [BR:
csat03012
]
104789873
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104789873
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
104789873
Translation factors [BR:
csat03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104789873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
dsrm
HA2_N
DEAD
Dicer_dimer
Motif
Other DBs
NCBI-GeneID:
104789873
NCBI-ProteinID:
XP_019102116
LinkDB
All DBs
Position
6:complement(16399..22583)
Genome browser
AA seq
831 aa
AA seq
DB search
MSVSERVAYERGEQLGESVGYKVRLEGVRGRDTRLLFCTTGILLRRLLVDRNLRGVTHVI
VDEIHERGMNEDFLLIILKELLSRRPELKLVLMSATLDAELFSSYFGGAGVIHIPGFTYP
VRSHFLEDILEMTRYRMTPYNQIDDYGQERMWKMNKQIPKKRKSQIAFVVEDALRAADFK
EFSPETQESLSCWNPDCIGFNLIEFLLCDICENEGPGGILVFMTGWDDISALKEKLQIHP
IFGNPDRVMLLACHGSMASFEQRLIFEEPASGVRKIILATNIAETSITINDVAFVIDCGK
AKETSYDALNNTPCLLPSWISKVSAQQRRGRAGRVRPGQCYHLYPKCVYEAFTEYQLPEI
LRTPLQSLCLQIKSLNLGSISEFLSRALQSPESLAVQKAIEYLKIIGALDENEYLTTLGR
YLSKLPMEPKLGKMLILGAILGCLDPILTVVAGLSVRDPFLTPQDKKDLAEAAKFQFSRD
HSDHLALVRAYEGWRNAEEESAVYDYCWKNFLSIQSLRAIDSLRKEFFSLLKDTGLIDGN
KSICNSEGNDANLTRAVICYGMYPGICSVVHNERSISLKTMEDGQVLLYSNSVNARETKI
PYPWLVFNEKIKVNSVFLRDSTAVSDSTLILFGGSISKGDIDGHLKMLGGYLEFFMKPAV
AEICQILKKELDDLIQNKLLNPKMDMQAHRELLSAIRLLVSGDGCDGRFVFGRQVRRPLE
TSALSTKPTLLSRTESGPGGDNSKSQLQTVLTRAGYAAPIYKTKQLMNNKFQTTVEFNET
QIIGQPCSNKKSAEKDAAAEAIQWLRGGAKESHEQVNHMSKLLKKSKKDHL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtatcggagagggttgcttacgagagaggagagcagttgggtgaatccgttgga
tataaagttcgattggaaggtgttagaggaagagatacccgcctactcttctgtaccaca
ggcattttgttgagacggttgttggtagatagaaatttaagaggtgttactcatgttatc
gtggatgaaattcatgagcgtggaatgaatgaagatttccttcttatcattcttaaggag
ctgctatctcgtcgcccagagcttaagctggttctgatgagtgcaactttagatgctgag
cttttttcgtcatactttggtggggcaggtgtcattcacatcccaggatttacatatcca
gtccgcagccatttcctagaggatattctggagatgaccaggtatagaatgactccatac
aatcaaattgatgattatggtcaagaaagaatgtggaagatgaacaaacagatcccaaaa
aaacgcaagagccaaattgcctttgtcgttgaggacgcactgagagctgctgacttcaag
gagtttagccctgagactcaagagtctttatcttgttggaatcctgattgcattggtttt
aatctcatagaatttctcctttgcgatatatgtgagaatgagggtcctggtggtatttta
gtttttatgactgggtgggatgatatcagcgctctgaaagaaaaactgcagattcatcca
atctttggcaacccagatcgggttatgttgcttgcctgccatggttctatggcaagtttt
gagcagaggttaatatttgaagaacctgcaagtggagtaagaaagataattctggccacc
aatatcgcagaaacgagcatcacgattaatgatgttgcttttgtcatcgactgtggaaag
gcaaaagagacctcctatgatgcattaaacaatactccctgtttgcttccttcttggatt
tccaaggtttcagctcagcagcgaagaggacgagccggtcgtgttcgacctgggcagtgt
tatcatctttacccaaagtgtgtatatgaagcttttacagaatatcagttgcctgaaatt
ttgaggacgcctttacagtcactgtgtctgcaaatcaaaagcttaaatctcgggagcata
tccgagttcttgtcaagggcgctgcaatctcccgaatcactagcggttcaaaaggccata
gaatatctgaagataataggcgcattagatgagaatgaatacctcacaactctaggtcgt
tatttgtccaagcttcccatggagccaaagcttggaaaaatgctcatactaggagctatt
cttggttgccttgatcccatattgactgttgtcgctggcctgagtgtaagagatcctttc
ttgacacctcaggacaagaaagatctcgcagaagctgcaaaattccagttttcacgggat
cacagtgatcatcttgcacttgttcgggcatatgaggggtggagaaacgctgaggaagag
tctgctgtatatgattactgctggaaaaactttctgtcaatacagtcgctgagagctatt
gattctctccgaaaagagttcttctcattacttaaggatactggactcatagatggaaac
aaatcgatctgcaattcagaggggaatgatgcgaatcttaccagagccgttatttgttat
ggcatgtatccaggaatctgctcagttgtgcataatgagagatcaatttccctgaagacg
atggaggatggccaagttcttctttattcaaattctgtaaatgcacgggaaacaaaaata
ccatatccgtggttggtgttcaacgagaagataaaagtgaactctgttttcttgagggat
tcgacagctgtctctgactctactcttatcctctttggcggtagcatctccaaaggagac
attgatggccacctgaaaatgttgggaggatacttggagtttttcatgaaacctgctgtt
gcagagatatgccaaatcttgaagaaagagcttgacgatctgatacagaacaaactactt
aatcctaaaatggacatgcaagcacaccgtgaactcttatcagctatacggttgttagtc
tctggggatggatgtgatgggagatttgtgtttggtcgccaagtacgtaggcctttagaa
acatcggctttgtcaacaaaaccgacattgctttcaaggaccgaaagtgggccggggggt
gacaattccaagagtcagctccagacagtactcactagggctggttatgcagcaccaatt
tataagactaagcaattgatgaacaacaagttccaaacaacagtagaatttaatgagaca
cagatcataggacaaccttgcagcaacaagaagagtgctgagaaagatgcggcagctgag
gctattcaatggctgaggggcggggctaaggaaagtcatgagcaggtgaaccatatgtca
aagctgctgaagaaaagcaagaaggatcacctctga
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