Camelina sativa (false flax): 104790145
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Entry
104790145 CDS
T05044
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104790145
09123 Folding, sorting and degradation
03018 RNA degradation
104790145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104790145
03041 Spliceosome [BR:
csat03041
]
104790145
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104790145
mRNA degradation factors
5'-3' decay
Lsm complex
104790145
Spliceosome [BR:
csat03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
104790145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
104790145
NCBI-ProteinID:
XP_010514155
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All DBs
Position
6:2152818..2153836
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AA seq
80 aa
AA seq
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MVANVFSFSVTGTLKGYDQLLNLVLDEAVEFVRDHDDPLKTTDQTRRLGLIVCRGTAVML
VSPTDGTEEIANPFGQPEAV
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggttgcaaatgtgttttctttttcagtcactggaactcttaaaggctacgatcaattg
ctcaatcttgttcttgatgaagcagtagaattcgttagagaccacgatgatcctttgaag
actactgaccagacaagacgccttggtttaattgtttgccgtggaacagcggtcatgctt
gtctcgccaaccgatggcactgaagaaatcgctaacccatttggtcaaccagaagctgtc
taa
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