KEGG   Camelina sativa (false flax): 104791133
Entry
104791133         CDS       T05044                                 
Name
(RefSeq) protein RRP6-like 1 isoform X1
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
csat  Camelina sativa (false flax)
Pathway
csat03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104791133
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104791133
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     104791133
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC DUF5734
Other DBs
NCBI-GeneID: 104791133
NCBI-ProteinID: XP_010515250
UniProt: A0ABM0ZG56
LinkDB
Position
1:complement(14955504..14959979)
AA seq 535 aa
MEEDSVASWKHHGKAKVSFHVATINKPQEEFKILVDNANKPFDHVFLERSEDGLRFIHPL
EKLSVVDFVDQNLIERKPVKPLPLEETPFKIVEDVKDLKELAATLQSVEEFAVDLEHNQY
RSFQGLTCLMQISTRTEDYIVDTFKLWDHIGPYLRELFKDPKKKKVMHGADRDIIWLQRD
FGIYVCNLFDTGQASRVLKLERKSLEFLLKHYCGVAANKEYQNADWRIRPLPDVMTRYAR
EDTHYLLYIYDVMQIDLHIMAKENEQSDSPLIEVYKRSYDVCMQLYEKELLTGDSYLHVH
GVQTGHLNAVQLAIIAGLCEWRDQIARADDESTGYVLPNKTLIDIAKDMPINVGQLRRLL
KSKHPYIERNFDAVISVIRRAMQNAAAFEPVVQSLKDWRPGTVEKNIKPMIEKPGTEFTA
YTKKRKFESELSNKLQAKEVVKVSKSKPDNVIVLDDYDDTDEQSWERGDASNRALEMPSK
GSMTQVPHTSSTEIVVIEDDDESENDSESREDEDMIRRSEKHRRFMSLKRGFLNI
NT seq 1608 nt   +upstreamnt  +downstreamnt
atggaggaagattcagttgctagttggaaacatcatggcaaggccaaggtttctttccat
gtggcaacgataaacaagcctcaagaggagtttaagattttggtggacaatgctaataaa
cctttcgaccatgttttcttggagaggagtgaggacggtcttcgcttcattcatcctttg
gagaaactttcggtggtggactttgtggatcaaaatcttatagagaggaaacctgttaag
cctctcccattggaagagactccttttaagattgttgaagatgtcaaagatctcaaggaa
ttagctgccacattgcaaagtgttgaagagtttgctgttgatctggagcataatcagtat
agatcttttcaaggattaacatgtttgatgcaaatctccaccagaaccgaggattatatt
gttgatacattcaagctttgggatcacattggtccttatctaagggaactcttcaaagac
cctaaaaagaaaaaggttatgcatggagcagatcgtgatattatttggcttcaacgggac
ttcggcatttatgtctgcaatctttttgacacaggacaggcctcaagggtgctaaagctg
gagagaaagagtctcgaatttcttctgaagcattattgtggagttgctgcaaacaaagaa
taccaaaatgcagactggagaatacgaccccttccggatgtaatgacaagatatgctaga
gaagatacccattatcttttgtacatttatgacgtaatgcaaatagatttgcacataatg
gcaaaggaaaacgagcaatctgactctcctctaatagaggtttacaaacgcagttacgat
gtgtgcatgcaactatatgagaaagagcttttgactggggattcatatcttcacgttcat
ggggttcagacaggtcatctcaatgcagttcaacttgccattattgcggggctttgtgaa
tggcgagatcagattgcacgtgcagacgatgagagcaccggttatgtattgccaaacaaa
acacttattgatatagccaaggatatgccaattaatgttggccagttgcgccggttgttg
aagtctaagcatccttacatcgagcgtaattttgacgctgtgatcagtgtcatcagacga
gcaatgcaaaatgcagcggcattcgagccagttgttcaatctttaaaagattggcgtcct
ggaacagttgagaaaaatatcaaacctatgattgagaaaccgggcacagagttcacagct
tatacgaagaaacggaagtttgaaagtgaactttcaaacaagttgcaggcaaaggaagtt
gttaaagtgtccaagtcgaagccagataatgtcatagtgctggatgattatgatgatact
gatgaacagagctgggaaagaggggatgcttccaatagggctttggaaatgccttctaag
ggatcgatgactcaagtgccacatacaagtagtacggaaattgtggttatagaagatgat
gatgagtcagagaatgactcagaaagtagagaagatgaagatatgattaggagaagtgag
aagcataggagattcatgagtctaaaacgcggctttcttaacatttag

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