KEGG   Camelina sativa (false flax): 104791147
Entry
104791147         CDS       T05044                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
csat  Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:csat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csat03009]
    104791147
Ribosome biogenesis [BR:csat03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    104791147
SSDB
Motif
Pfam: WD40_Prp19 WD40 EIF3I WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML NBCH_WD40 Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_IP5PC_F Beta-prop_DCAF12 Beta-prop_LRRK2 Beta-prop_SCAP Beta-prop_SPT8 VPS8_N WDR54 Beta-prop_WDR75_2nd DUF4987 PROPPIN
Other DBs
NCBI-GeneID: 104791147
NCBI-ProteinID: XP_010515264
LinkDB
Position
6:13035703..13038001
AA seq 435 aa
MEISVIASSSVDSEIGSWDLKTGNKLLQFKPCASPAHGLTAVGEKFLAASQLRKESASSG
SIFYWSWNKPQVEVKSFPVESIKALTANNEGTYLVGGGTSGDIYLWEVATGRLLKKWHGH
YRAVTCLVFSGDDSLLVSGSQDGTVRVWSLLRLFDDFQRQHGNTLYEHNFNEHTMSITDI
VIDYGGSNAMIISSSEDRTCKVWSLSKGELLKNIIFPSAINSVALDPCGSVFYAGARDSK
IYIGAINATSEYGTQVLGSVSEQSKAVTCLAYCADGNLLISGSESGVVCVWDPKSRRPVR
TFNLGKNPVNNIQVVRKTIVANSSKAQSSWKRRGSLIPPPLEKYERSGEDTMDGIVTIDP
PPYSDVPVYSSFLSADLIDEQVNELQQQGSAATEIEMERLKLEYKRSLQMNDQWQKNYEN
LLQVVMEEEQIGGSN
NT seq 1308 nt   +upstreamnt  +downstreamnt
atggagattagtgtaatcgcttcatcgtcggtcgacagtgaaattggaagctgggatctc
aaaaccgggaacaaactgcttcagttcaaaccgtgtgcttctccggcgcatggtctcacc
gccgtcggcgagaaattcctcgccgcctctcagctccgtaaagaatctgcttcttctggc
tcgattttttactggtcttggaataagcctcaagttgaagtgaagagcttcccagttgaa
tcaataaaggcacttacagcaaacaatgaaggaacttacttagttggtggtggaacctct
ggagatatttatctttgggaggttgcgactgggaggttgcttaagaagtggcatggtcat
tatcgtgcagtaacatgcttggtgttctctggagatgattctttgttagtttcaggatct
caagatggaactgttagagtttggtctcttttaaggttatttgatgatttccagaggcag
catgggaacactctttatgaacacaattttaatgagcatacaatgtctataactgacatt
gtcatagactatggaggctccaatgctatgataatttcttcttcagaagatcggacttgc
aaggtttggagtctgtcaaaaggggaattgttgaaaaatatcatttttccttcagccatc
aattcagtcgcattggacccttgcgggtctgtgttctatgctggtgccagagacagcaag
atctatatcggtgctattaatgccacaagtgaatatgggacacaagttcttggttcagta
tccgaacagagcaaagctgttacttgcttagcatattgcgcagacggaaaccttttaata
tctggatcagaaagtggtgtggtttgtgtttgggatcccaaatcacgtcgccctgttcgt
actttcaaccttgggaaaaatcctgtgaacaatattcaagttgttagaaaaacgattgtt
gctaattccagcaaagcacaatcttcctggaaaagacgtgggtctttgatcccaccgcct
ctggaaaaatatgaaagatcaggagaagatactatggatggtatcgttaccattgatccg
ccaccatattctgatgttcctgtttactcttctttcctcagtgctgaccttattgacgag
caagttaacgaacttcagcaacaaggctctgcagcaacggagatcgaaatggaaagactg
aaacttgaatacaaaagatctttgcagatgaacgatcaatggcagaagaattacgagaat
ttgcttcaggtggttatggaagaagaacaaatcggtggttccaattga

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