Camelina sativa (false flax): 104791242
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Entry
104791242 CDS
T05044
Name
(RefSeq) small RNA degrading nuclease 1-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104791242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104791242
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
RNases
104791242
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
DNA_pol_A_exo1
SET_assoc
DEDDh_C
Motif
Other DBs
NCBI-GeneID:
104791242
NCBI-ProteinID:
XP_010515378
UniProt:
A0ABM0ZGE5
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All DBs
Position
6:13654866..13657556
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AA seq
412 aa
AA seq
DB search
MELQLATAEKEVLEELVKLLQSRDLRGEKGNWKEFLNVYDKNVQSPIDPSRRSRDDLVQF
LTTFKKKQDLQVLKCHANHLLIEKLKQESEDRDTPEQMLVRLTVEHLNYSLDYSFQPYSE
DWFVSDVGLKMSKVMKSTQIVALDCEMVLCEDGTEGLVRVGAVDRDLKVILDKFVKPDKP
VVDYRAHITGVTAEDIANATLSVADIQETLQPLLSEGTILVGHSLNRDLQVLKIDHPKVI
DTALVFKYSNARKLRRPSLNNLCKSILGCEVRKVDVPHDCVHDATAAMKLALAVIEKRAD
TTIKPSKEMLEVEKRKLFLHKIPHNVTSEELNQLLSGEFTLEVKPAKTERGYRCAFAVFD
NSEEADQAFENVDGTQMTDSLGLPQKLVVLKRSSGSIASLYVRKMVQDDDAT
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcaactagccaccgctgagaaagaagtgcttgaggagttggtgaagttactg
cagagtcgagatttgcgaggagaaaaagggaactggaaggagtttttgaatgtttacgac
aaaaatgttcaatcacctattgacccttcgaggcgttcccgtgacgatttggtccagttt
ctgactacttttaaaaagaaacaagatttgcaagttctgaaatgtcacgccaatcatctt
ctgattgaaaagttgaagcaggaatccgaagatagagacactcctgagcagatgctagtt
agattgaccgttgagcatctgaattactctctagactattcgttccagccatactccgag
gactggtttgtatctgatgttggattgaagatgtcaaaggtgatgaaatcaactcaaata
gtagctcttgattgtgagatggttctttgtgaagatgggactgagggtttagttagagtt
ggcgctgtagaccgtgatttaaaggtgattcttgacaaatttgtgaaaccggacaaacct
gttgttgactacagagcacacataacaggtgtgactgctgaagatatcgcaaatgctaca
ctctctgtggcagatatacaggaaactttgcagcctcttctttctgagggtacgattttg
gtaggtcacagtttgaacagagatttgcaagtgttgaagatagatcatcccaaagtaatt
gataccgcgcttgtgttcaagtattcaaatgcacgaaagctcagaagaccttcacttaac
aacctttgcaagtctattttgggttgcgaagtccgaaaggtcgacgttcctcatgattgt
gtacatgatgcaacagctgcgatgaaacttgcacttgctgttatagagaaaagagctgac
acaacaatcaaaccatctaaagagatgctggaggttgagaaaagaaaactctttctacat
aaaatccctcacaatgtgacatctgaagagctgaaccaacttctttctggagagtttaca
cttgaagttaagccagcaaaaacggagagaggttaccgttgtgcatttgctgtttttgat
aattcagaagaagcagatcaagcatttgaaaacgttgatggaacccaaatgacggattca
ttggggttgccacagaaactggtcgtcttgaagcggagttcgggatcaatagctagttta
tatgtccgtaaaatggttcaagatgatgatgcaacgtag
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