Camelina sativa (false flax): 104791738
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Entry
104791738 CDS
T05044
Name
(RefSeq) structural maintenance of chromosomes protein 1
KO
K06636
structural maintenance of chromosome 1
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csat03036
]
104791738
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
104791738
Meiosis-specific proteins
Cohesin complex and associated proteins
104791738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_29
AAA_21
AAA_23
EzrA
ABC_tran
AAA_27
DUF3450
THOC7
DUF2935
SbcC_Walker_B
Laminin_II
Motif
Other DBs
NCBI-GeneID:
104791738
NCBI-ProteinID:
XP_010516004
LinkDB
All DBs
Position
6:16338566..16346748
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AA seq
1218 aa
AA seq
DB search
MPSIQAPPGKILQLEMENFKSYKGHQLVGPFKDFTAIIGPNGAGKSNLMDAISFVLGVRT
GQLRGSQLKDLIYAFDDRDKEQRGRRAFVRLVYQMEDGVELRFTRTITSAGGSEYRIDNR
VVNLDEYNGKLRSLGILVKARNFLVFQGDVESIASKNPKELTGLLEEISGSEELKKKYEE
LEEKKASAEEKAALIYQKKKTIGNEKKLKKAQKEEAEKHLRLQEELKALKRERFLWQLYN
IENDIEKATEDVDSEKSNRKDVMRELEKFEKEAGKRKVEQAKYLKEIAQREKKIAERSSK
LGKIQPELLRFKEEIARIKAKIESNRKEVEKRKKEKGKHSKEIEQMQRSIKELNMKMERL
NEKRQDSSGKLPMLDSQLQDYFRIKEEAGMKTIKLKDEYEVLDRQHHTDLEALKNLEENY
QQLINRKTDLDEQIKGFISRQTNIEESSSEYKNETTSLKKELRALQEKHRDARNASENLK
TRIEEVENQLSDLTAERYENERDSRLTQAVESLKRLFQGVHGRMTDLSRPNRKKYNLAVT
VAMGRFMDAVVVEDENTGKDCIKYLKEQRLPPMTFIPLQSVRVKPVFERLRNLGGTAKLV
FDVIQFDPELEKAVLFAVGNTLVCDELEEAKALSWTGERFKVVTVDGILLTKSGTMTGGT
SGGMEAKSNKWDDKKIEGLKKKKEDYELQLENIGSIREMQMKESEISGKISGLEKKIQYA
EIEKKSIKDKLPQLEQEKQNITKEIERVDPELAKAKTQVDKRITEMKKLEKRINEIVDRI
YKDFSQSVGVENIREYEETQLKNAKMEAEERLDLSNQLAKLKYQVEYEQNRDVGSRIRKL
ESSISSLETDLEGIQKTMSERKETAEKITNEINNWKKEMGECKQKSEEYEKEILDWKKQA
SQATTSITKLNRQIHSKETQIEQLISQKQEIIENCELEHITLPVLSDAMEEDDSDGPQFD
FTELDRAYLQERKPSAREKVEAEFRQKIESKTAEIERTAPNLRALDQYEAIQEKEKQVSQ
EFEAARKEEKQVADAYNTVKQKRYELFMEAFNHIASNIDKIYKQLTKSNTHPLGGTAYLN
LENEDDPFLHGIKYTTMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYRPSPFFILDEVD
AALDNLNVAKVAKFIRSKSCQAGRDNQDAEDGNGFQSIVISLKDSFYDKAEALVGVYRDT
ERSCSSTMSFDLRSYQES
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgatacaagccccaccggggaagatcctgcaactcgagatggagaatttcaaa
tcttacaaaggtcatcaattggttggtcctttcaaggatttcactgctatcattggtcct
aacggtgccggcaaatctaacctaatggacgctattagcttcgtccttggtgttcgtacc
ggtcaactccgtggttctcagcttaaggatcttatctacgcttttgatgatcgtgacaag
gaacagagaggccgtagagcttttgttcgactcgtttaccagatggaagatggtgtagag
cttcgtttcactcgtactatcactagcgctggtgggagtgagtaccgtatcgataatagg
gttgtgaatctggatgagtacaatgggaagctgcgatctctagggattcttgttaaggct
cgtaatttcttggtgtttcagggtgatgttgaatctattgcttccaagaatccaaaagaa
ctcactggactcctcgaggagatttctgggtccgaggagcttaagaaaaagtatgaagaa
ctagaagagaagaaggccagcgctgaagaaaaggcagctcttatataccagaagaagaaa
acaattgggaatgagaagaagctgaagaaagcacagaaggaagaagctgagaagcatctt
aggctgcaggaagaactgaaagctctgaagagagaacgcttcctatggcaattgtataac
attgagaatgatatagagaaggcaactgaggatgtcgactcggaaaagagcaatcgtaaa
gatgtcatgagagagctggaaaagtttgaaaaagaagctggtaagcgaaaggtagaacaa
gcaaagtatctgaaagaaattgctcaacgtgagaagaaaattgctgagagaagctcgaag
cttggaaaaattcaacctgagcttctgaggtttaaagaggagatagctcgcataaaagca
aaaattgagagcaatcgaaaggaggtggagaagaggaaaaaagaaaaagggaagcattcc
aaagaaattgaacagatgcagcgtagcattaaggagctgaatatgaaaatggaaagatta
aatgagaagagacaagatagcagcgggaaactcccaatgctcgacagtcaactgcaagat
tattttcgaataaaagaagaagctgggatgaaaaccattaagctaaaagatgagtacgag
gttctagataggcagcatcatactgatctcgaagcattgaaaaatctggaagaaaattac
cagcaactaataaatagaaagactgatcttgatgaacaaattaagggatttatatccagg
caaacaaatattgaagaatcttcttcagaatataagaatgaaacaactagtctgaaaaag
gagttacgtgcattgcaagagaagcatcgagatgccaggaatgcctctgaaaacttgaag
acgagaatcgaggaagtagaaaaccagttaagtgatttaacagctgaaaggtacgaaaat
gagagagatagtcggctaacacaagctgttgagtctctcaagcgtctttttcaaggagtt
catggtcggatgactgatctttctcggccaaatcggaaaaagtataaccttgctgtcact
gttgctatgggaagatttatggatgcagtagttgtagaagatgaaaacacgggaaaagat
tgcatcaagtacttgaaagagcaaaggcttcctcctatgacatttattcctcttcagtca
gtacgtgtcaagccagtgtttgaaagattgagaaatttgggtggcactgcaaagctggtt
ttcgatgttatccagttcgatcctgaattggagaaggcggtcctttttgctgttggaaat
actctagtctgcgacgaacttgaagaagccaaggctcttagctggaccggagagagattt
aaagttgtgactgttgatggtatattactcacaaagtcgggaacaatgactggtggtacc
agtggtggaatggaagcaaagtctaataaatgggatgataagaaaattgaaggattgaag
aaaaagaaagaagattatgaactacagttggaaaatattggatctattcgagaaatgcag
atgaaggagtctgaaatatctggaaaaataagtggacttgaaaaaaagattcagtatgct
gaaattgagaagaaaagcatcaaagacaaacttccacagcttgagcaagagaagcagaat
attactaaagaaattgaacgcgtagatcctgaactcgctaaggctaaaactcaggtcgat
aaaagaataacagaaatgaagaagttggagaaaagaatcaatgagattgttgaccgtatc
tataaggattttagccagtcggttggggttgaaaacatacgtgaatatgaagaaactcag
ctcaagaatgctaaaatggaggctgaagaaaggctggatttgagtaaccagcttgctaaa
ttaaaataccaagtggaatatgagcaaaaccgagatgtgggttcacgaattcgaaagcta
gagtcttctatcagttctttggaaactgatttggaaggtatacagaagacgatgtctgaa
cgtaaggagacagcagaaaaaattactaatgaaatcaacaattggaagaaggaaatggga
gagtgcaaacaaaagtcggaggagtatgagaaggaaatcctggattggaaaaagcaggct
tctcaagcgacaacaagcataaccaagctcaatcgtcaaatacattcgaaggaaacacaa
attgagcagctgatctcgcagaaacaggaaataattgagaactgtgagctcgaacatatt
actcttcctgttttgtcagatgctatggaggaagatgactcagatgggccacagtttgac
tttactgagttggatagagcttatctccaagaacggaaaccatctgctcgtgaaaaagta
gaggcggaattcaggcagaaaatagaatctaaaacagcagagattgaaagaacggctcca
aacttgagagcacttgaccagtatgaggctatacaagagaaagaaaaacaagttagccag
gagtttgaagcggccaggaaagaggagaagcaagtagcggatgcctataatactgttaag
cagaagaggtatgagctatttatggaagctttcaaccacattgctagcaacattgacaag
atctataagcaactaaccaagagtaatacgcatccactgggtgggactgcttatctaaac
ctagaaaatgaggatgatccgtttctacatggtataaagtatactacaatgcccccaaca
aagcgatttcgcgacatggaacagctctctggaggagagaaaacagttgcggccttggcg
ttgctcttctccatccatagctataggccttcaccgttcttcatacttgatgaagtggat
gctgcgcttgataatttaaacgtggcaaaagttgctaaattcattcgtagcaagtcatgc
caagcaggacgtgacaatcaggatgcagaggatgggaatggcttccaaagcattgtaata
tctctgaaggacagcttctatgacaaggcggaagctctggttggagtttacagagacacc
gagaggagttgctcgagtacaatgtcatttgaccttaggagctaccaagaatcgtga
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