Camelina sativa (false flax): 104791771
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Entry
104791771 CDS
T05044
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' epsilon isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104791771
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104791771
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104791771
03036 Chromosome and associated proteins [BR:
csat03036
]
104791771
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
104791771
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
104791771
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
104791771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
VGLL4
DUF6724
TetR_C_16
Motif
Other DBs
NCBI-GeneID:
104791771
NCBI-ProteinID:
XP_010516038
LinkDB
All DBs
Position
6:complement(16511856..16513963)
Genome browser
AA seq
492 aa
AA seq
DB search
MFNKIIKLGQKKFNKSDQHHQDNNNPSTNNVVRSSRTAPTTASSVSNGESQTTASSPSQT
PNHPMFTTTPTLEVLPLLKDVSSSDRPLLFMKKAHMCSCHCDFSDTLIMPREKAIKRQTL
LELVDFLHSSSGKVNETMQSELIRMVSANIFRCLPPAHHENTGAPPEGNDPEEEEPYLEP
WWPHLQLVYELLLRYVVSSEIEPKTAKKFINHTFVSRLLDLFDSEDPREREYLKTVLHRI
YGKFIFHRPFIRCSIYNVFYKFLYETERCIGVGELLEILGSVINGFTVPMREEHRLYLVK
AILPLHKSKSISIYHQQLSYCVTQFVEKDYKLADSVIRGLLKFWPLTNCQKEVLFLGELE
EVLDATEPSEFQQCVVPLFTQIGKCLNSAHFQVAERALFLWNNEHIVGLIAQNKDVIFPI
IFEALERNMKGHWNQAVHGLSENVRRMFLEMDTDLFEECEKQHAENEAKACVMLEQRELT
WRRLEEAASLAA
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaaatcattaaactgggtcagaagaaattcaacaaatcagatcaacaccac
caagataacaacaacccctccaccaacaacgtcgtccgcagcagccgcaccgcacccacc
accgcatcctctgtttcgaatggcgagtctcaaacgacggcttcttctccttcgcagaca
ccaaaccacccaatgttcacaacaacgccgaccctcgaagtgcttcctctgttaaaagac
gtgtcttcctcagatcggcctctcctcttcatgaagaaggctcacatgtgttcttgccat
tgtgatttctctgatactctgataatgccacgtgagaaagcgatcaaaaggcagacgctt
cttgaattggttgatttccttcactcttcctctggtaaagtcaatgagacgatgcagagt
gagctcatacgtatggtttcagctaacattttccggtgtctcccacctgcgcatcatgag
aacactggagctcctcctgaagggaatgatcctgaagaagaagagccttatcttgagcca
tggtggcctcatttgcagctcgtttacgagcttcttttgcggtacgttgtgtcttccgaa
atcgagcctaagactgcgaaaaagttcatcaatcacacctttgtgtcgaggttacttgat
ttgtttgactctgaggatcctagggagagggagtatttgaaaactgttcttcataggatc
tatggaaagttcatatttcaccgcccttttatcaggtgttcgatttataacgttttctac
aagttcttgtatgagactgagaggtgcattggtgttggtgagttgttggagatccttgga
agcgtgatcaatggctttacagtacctatgagagaggagcataggttgtatcttgtgaaa
gctattttgccactacataagtctaagagtatctccatctaccaccagcagttgtcgtat
tgcgtgacacagtttgtggagaaagattacaagttggctgattccgtgatccgaggcttg
ttgaagttttggccgcttacgaattgtcaaaaggaggttctgttcttgggagagttggaa
gaagtcttggatgctacagagccctctgagtttcagcaatgtgttgttcctctctttact
cagattgggaaatgtcttaatagcgcacacttccaggtggcagagagagctcttttcttg
tggaacaatgaacatatcgtaggcttgattgctcagaacaaagacgtgatcttccctata
atctttgaagcattggagaggaacatgaaaggacattggaaccaagcggtgcatggtcta
tctgagaacgttagaagaatgtttcttgagatggacactgatctctttgaggagtgcgag
aaacaacacgccgagaacgaagctaaggcatgcgtaatgttggaacaaagagaattgaca
tggaggagacttgaagaagctgcttctctagctgcttaa
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