Camelina sativa (false flax): 104791836
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Entry
104791836 CDS
T05044
Name
(RefSeq) AP3-complex subunit beta-A-like isoform X1
KO
K12397
AP-3 complex subunit beta
Organism
csat
Camelina sativa (false flax)
Pathway
csat04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
104791836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104791836
Membrane trafficking [BR:
csat04131
]
Endosome - Lysosome transport
Others
AP-3 complex
104791836
Endosome - Golgi transport
104791836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
AP3B1_C_2
AP3B1_C
HEAT_2
INTS1_R4
Svf1_C
Motif
Other DBs
NCBI-GeneID:
104791836
NCBI-ProteinID:
XP_010516119
LinkDB
All DBs
Position
6:complement(16866226..16871305)
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AA seq
1115 aa
AA seq
DB search
MFNQFGSTSETLSKASAVVLRIGTDAHLYDDPEDVNIAPLLDSKFESEKCEALKRLLALI
AQGFDVSNFFPQVVKNVASQSSEVKKLVYLYLLQYAEKRPNEALLSINYFQKDLGDPNPL
VRAWALRTMAGIRLHVIAPLALAAVSKCARDPAVYVRKCAANALPKLHDLRLEEHAPAIE
EIVGILLNDHSPGVVGAAAAAFTSICPNNFELIRKNYKKLCQILPDVEEWGQILLIGTLL
RYVVARHGLVRESLMLSLHGMDSNGFCEKDALVRDLTLDKEDGGKSDSFDVNLVNVVSKC
YIEGPDEYLSRSSCLDPVTSAFDSKETTSVAHNEDVKILLQCTSPLLWSNNSAVVLAAAG
VQWIMAPLEDVKKIVKPLLFLLRSSSASKYVVLCNILVFAKAAPSLFAPHFENFFICSSD
AYQVKAHKLEMLSLVATTSSISSILREFEDYIKDPDRRFAADTIAAIGLCARRLPTIPTT
CLDGLLALVRQESFAGDPESVDGEEGVLVQAVMSIQTIIERDPDSHDKVIIQLFRSLDSI
KVAAARATIIWMVGVYCSLGPIIPRMLTTLTKYLAWSFKSEASETKLQILNTTAKVLISA
KVDDFQMLKRIMVYMLELGECDLSYDIRDRTRFLKKLLPCKLASHEATEDSVASQENIAV
HVVEHVFGSKLKPFLPLGLNDRFYLPGSLSQIVLHAAPGYEPLPKPCSFVFEEHDQLSDS
DRQRDAGAVLDRSQESSETGDEDGSSDYDSESSVGSEFSSDDNERKVSNDASDPAAPLIQ
ISDTSVSADQEELRSRRALDLWLDDQPSTSNQTPSAVNSNQSSYAKISIGDIGSRVKPKC
YSLLDPGNGSGLKVDYAFLSEVSIVSPLHVCVEVLFENSSGEPILDVNLEDEESMKVADS
SEQTLVGKANASYNNVPTLIPLEEISCLEPRQSAKRLIQVRFHHHLLPMRLTLHYNGKKV
PVKLRPDLGYLVKPFSMSIEEFLATESRLPGMFEYSRRCTFDDHVKDSRMENGKDKFLSI
CECITLKVLSNSNLHLVSVDLPVANTLEDATGLRLRFGSKILSSEIPLLITITVEGKCTE
VLNLTVKINCEETVFGLNLLNRIANFMVEPSSSTN
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatcagtttggttcgacttcggagactctgagcaaagcttcagctgtggtgctc
cggatcggcactgacgctcatctttatgatgatccagaggatgtcaacattgctccacta
ttagatagcaagttcgaatccgagaaatgtgaagctcttaagcgtctccttgctcttatc
gctcagggctttgatgtctccaatttcttccctcaggtggtgaagaatgttgcgtcacag
tcatcggaagtgaagaagctagtttacttgtatttgctacaatatgcggaaaagcgtcca
aatgaagcattgttatcgattaactattttcagaaggacttgggggatccaaacccattg
gttagggcttgggcacttcgtacaatggcagggattcgcttacatgttattgcacctctt
gcacttgctgctgtgagtaaatgtgctagggatccagctgtctatgtcagaaaatgtgct
gcaaatgctcttcctaagttgcatgatttgcgtctggaagaacatgctcctgcaattgaa
gagatagttgggatattattgaatgaccattctccaggagttgttggagcagcggcagcg
gcattcacctcaatctgtccaaataacttcgaactgattagaaagaactataagaagttg
tgtcagattcttcctgacgtagaagagtggggtcagatattacttataggaactcttttg
cgctatgtggttgcaaggcatggacttgtacgggaatctttgatgttgtccctacatggt
atggatagtaatggcttctgtgagaaggatgccctagtcagagatcttacattggataaa
gaagatggtggtaaaagtgattcatttgatgttaatctggttaacgttgtttcgaaatgt
tacattgaaggtccagatgagtatctatctagatctagttgcctcgatccagttacatct
gcattcgatagcaaagagaccacatctgttgcacataatgaagatgttaagatcctgctt
cagtgtacatccccattgttatggagtaataacagtgcggttgtactagcagcagctggc
gttcaatggataatggcacctctagaagatgttaaaaaaattgttaaaccgctcttgttt
ttgcttaggtcatccagcgcctccaaatatgtggtcctctgcaatatcctagttttcgcc
aaagcagccccctctctctttgctccacacttcgaaaatttcttcatttgttcctccgat
gcatatcaagttaaagcacataagctggagatgctatctctcgttgctaccacttcatct
atctcttcaattttgagagagtttgaggattatattaaagatccggacagaagatttgca
gctgatacaattgcagcgattggtttgtgtgcgagaagactgccaacaattccaactaca
tgtcttgatggattgctagcactagttcgacaagaatcttttgctggcgatcccgagtcg
gtagatggagaagaaggagtgttggtgcaagccgtgatgtcgatccaaactatcatagag
cgagatcccgatagtcatgataaagtgataattcagctgtttcgtagtctggattcaata
aaggtagctgctgctcgtgcaactattatttggatggtaggggtttactgctctttgggt
cctatcattcctaggatgctgaccacgttaaccaagtaccttgcatggagctttaaatca
gaggcatcagagacgaaactacagattcttaatactacagctaaggttctaataagtgca
aaggttgacgactttcagatgttgaaaaggattatggtttatatgcttgaattgggcgaa
tgtgacttaagctatgacattcgtgatcgaactcgtttcctcaagaagctgctgccatgc
aaattagcttctcatgaggccacagaagacagtgttgcatcacaagaaaatattgctgtg
catgttgtggaacatgtatttgggagcaaactgaaaccttttctacctttaggtctaaac
gatcgtttttatcttcctggatctctgtcacagatagttcttcatgcagcccctggatat
gaacctcttccaaagccctgtagttttgtgtttgaagaacatgaccagctgtcagattca
gatagacaaagggatgccggagctgtattggatcgatctcaggaatcctctgaaacaggg
gatgaagatggttcctctgattatgactctgaatcttctgttggttcagagttcagcagt
gacgataatgaaagaaaagtatctaatgatgccagcgatccagctgctcctttaattcaa
atttcagatacttctgtttccgctgaccaggaagaactaaggtccagaagggccctggat
ttgtggttagatgatcagcctagtacatcaaatcaaactccatctgcagtaaatagtaat
cagagctcttatgcgaagatatccattggtgatataggaagccgagtgaagccgaaatgc
tatagtctcttagaccctgggaatggcagtggcttgaaggtagactatgcctttttatct
gaagtctctattgtatccccattacatgtttgcgtagaagttctgtttgagaacagttct
ggggaacctatcctggacgtgaatttggaagatgaagaatcaatgaaggtagcagactct
tctgaacagactttggttggtaaagcaaatgcatcttacaacaatgtgccaacactaatt
ccacttgaggaaatcagttgccttgaaccacgtcagagtgcaaagaggcttatccaggtt
cggtttcatcaccacttgcttcccatgaggttaaccttgcattacaatggaaagaaggtt
cctgtcaagttacgacctgatcttggataccttgtgaaaccattctcaatgagcatcgag
gaattcttagccacagaatctcgattacctggaatgttcgagtacagtcgaaggtgtaca
tttgacgaccatgttaaagattcaagaatggagaatgggaaagacaaatttctcagcatc
tgcgaatgcataacactaaaggtgcttagcaactcaaatctacaccttgtgtctgtggat
ttaccagttgcaaacacactcgaagatgcaactgggctgcgattaagattcggcagcaaa
atcttgagcagtgagatccctcttttgattaccatcacagtggaaggcaaatgcaccgaa
gttctgaatttaacagtcaagatcaattgcgaagaaacagtttttggtctaaacctgttg
aacaggatagctaatttcatggttgagccgtcttcttcaaccaattga
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