Camelina sativa (false flax): 104792097
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Entry
104792097 CDS
T05044
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104792097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104792097
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104792097
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
104792097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_UBOX
Beta-prop_NOL10_N
zf-RING_6
zf-Di19
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
104792097
NCBI-ProteinID:
XP_010516444
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Position
6:18152566..18158875
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AA seq
308 aa
AA seq
DB search
MAPGGSALKEVLESNSTGMDYEVKTAKVEVNNSKPTKPGGAGIGKYGIHSNNGVYELLEC
PVCTNLMYPPIHQCPNGHTLCSNCKVRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRY
QNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECSVTGDIPTLVVHLKDDHKVDMHDGC
TFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAK
KFSYSLEVGAHGRKLTWQGIPRSVRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLRV
TGRIWKEE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggctcctggaggcagtgctttgaaagaagtcttggaatctaattcaacgggaatggat
tatgaggttaaaacagcgaaagtggaagttaataatagcaaacctacaaaaccaggtggt
gcagggattggtaaatatggcatccattctaacaatggtgtttatgagcttcttgaatgt
cccgtctgtacaaatttaatgtaccctccaattcatcagtgtccaaatggccacacatta
tgttcaaactgcaaagtgagagtgcagaacacttgccctacatgtcgctatgagcttggt
aacataagatgcttagctcttgagaaagttgcagagtctttggaagttccatgccgatac
caaaatttggggtgtcatgacatttttccttactacagcaagcttaagcacgagcagcac
tgccggtttaggccttacacttgcccttatgctggctctgagtgttcggttacaggtgat
atccccacactagttgttcatcttaaagatgatcataaagtcgatatgcatgatgggtgc
actttcaaccaccgttatgttaagtcaaatccgcatgaagtcgaaaatgctacatggatg
cttacggtgttcaactgttttgggagacagttctgtttacactttgaggcgttccagctg
gggatggctccagtgtacatggcattccttcgtttcatgggagatgagaacgaggcgaag
aagttcagttacagcttggaagtaggagctcatggacgtaaactaacatggcaggggatc
cctagaagcgtgcgtgacagtcacaggaaagtccgggacagtcaagacggactcatcata
ccaagaaaccttgcactctacttctctggaggtgataggcaagaactcaagttgagagtg
accggtcgcatctggaaagaggagtaa
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