Entry |
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Name |
(RefSeq) RRP12-like protein
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KO |
K14794 | ribosomal RNA-processing protein 12 |
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Organism |
csat Camelina sativa (false flax)
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Brite |
KEGG Orthology (KO) [BR:csat00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:csat03009]
104792189
Ribosome biogenesis [BR:csat03009]
Eukaryotic type
90S particles
Other 90S particles
104792189
Pre-60S particles
Other pre-60S particles
104792189
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
6:18678868..18687808
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AA seq |
1280 aa
MESLCVDIETRMSLTPSEPDLPVSEDFGEYMRSRLTQSKRPDHEHLCAVIEELSKTLAED
NHSRTPVAYFAATCSSLNSILSGDGQPSLDVVQPHVVILSLVFPKVSAGILSRNGLALRL
VLDVLDLESATPECLMSGLKCLVHLLTTVESITGNEFSNSCSILLSFVIHSDGKVRKLAN
SGLRDVLLKSHGTQAWQSVSGAIAEMFQGCLDLAHHSELGSSEGARGAKQVLYILTTLKE
CLALMSQQHIATLIEGFQVLMILRDPYITRPVIDSLNALCLNPTADVPVEALVEVLSLAA
GLFSGHETSADTMTFTARLLKVGITRTFSINRDLCVVKLPSVFNGLKDILASEHEEAIFA
ATDALKSLIFSCIDERLIREGVNGIRNSNLNARMSSPTVIEKLCATVESLLDYRFHAVWD
MAFQIVSAMFDKLGDDSPYFLRKTLEDLSDMQDLPDEGFPYRKQLHVCVGSAVGAMGPET
FLSVVRLNLEASDLSEVKVWLFPILKQYTVGGRLSFFTETIFRMIETMSQKAQQLKLQGL
PGASWSVDSLVYSLWALLPSFCNYPVDTVESFADLGRILCGVLQTQAETRGIICASLNIL
IQQNKEVVEGKEISINEASPAMQRAVARYDSQHAAANLKVLRLCAPKLLDLLSRIFHESG
KDDGGSLQSAIGNLASIAEKKTVSKLLFKTLRELLEATKTDIAQDESSVSGMDVDNTTDK
NSSSNSRARLFDLLVSLLPGLDGQEVDTIFSSLKPALQDPKGLIQKKAYKVLSIILKSSD
GFVSKNLEELLNLMHNLCHVSAKRHKLDCLYFLLAHASRTDDLKERKDIVSTFLPEVILA
LKEVNKKTRTRAYDVLVQIGHAYADEENGGDNEQLHGYFNMVVGCLAGEKPQMISAAVKG
VARLTYEFSDLIASAYNLLPSTFLLLQRKNKEITKANLGLLKVLVAKSPVEGLHANLKSM
VEGLLKWPEGTKNLFKAKVRLLLEMLIKKCGTEAVRSVMPEEHMKLLTNIRKIKERKEKK
YAAGSDISKSQHSKDTSSKVSRWNDTKIFSDFDDEYEDSDGDDMDAESHGRSKASSLLKF
KASVLRSKKSRNQSHLEVDESDDEPLDLMDRYKTRLALRSSEFRKREDDSDEEAEFDEEG
RLVIREGGRAKRKEISDADSDAKSSKGSRFSGNSSRKNQKRMKTSESGYSYTGKEYASKK
ASGDLRRKDKVEPYAYWPLDRKMMSRRPEQRAVAVRGMSSVVKMAKRMEGKSTAEALATT
KFKKFKRSGQKKSAGKKKNK |
NT seq |
3843 nt +upstreamnt +downstreamnt
atggaatcattatgtgttgacattgaaaccaggatgtccctcacaccctcagaacctgac
ctgcctgtttcagaagattttggggagtacatgcgctctcgtttaacccagtcgaaacga
ccagaccatgaacatctatgtgccgtcatcgaggaattatcaaaaactctggctgaagat
aatcatagtcggacacctgttgcttactttgcggccacatgcagttcgctgaacagcatc
ttgtcgggtgatggtcaaccgtctttggatgtcgtccagccacatgttgttatcctttcc
cttgtgttccctaaagtctcagcaggaatactgagtaggaatgggttggctttgcgtctt
gtccttgacgttctggatctagaatcagccacgcctgagtgcttgatgtcgggattgaag
tgtttggttcaccttctcacaactgttgagtccattacggggaacgaattctctaattcc
tgcagcatcttgctgagttttgtaatccattcagatggaaaggtaagaaagctagcaaac
tcgggtctccgtgatgtcctgctgaaatcccatggaacacaggcctggcaatcagtcagt
ggagcaattgcagaaatgttccagggatgtttagaccttgcccatcactcggaattgggt
tcttcagaaggagccaggggagcgaagcaagtgctttacattctgaccactctaaaagag
tgcttggccttgatgtctcaacagcacattgctactctgattgagggctttcaggtgctg
atgattctgcgcgatccatacattacaaggccagtgatagactctttaaatgcactttgt
ctcaatccaaccgccgacgttccagttgaggcgctggtcgaagtgctgtcgcttgcagct
ggactgttctctggacatgaaacatctgctgataccatgacctttacagcacgtttgttg
aaagttgggattactaggactttttccataaacagagatctttgtgtggttaaacttcct
tctgtgttcaatggtctgaaagatattcttgcatctgaacacgaggaggcaatctttgca
gcaactgatgcattgaagagtttgatattttcatgcattgacgaaaggttgatcagagaa
ggtgtcaacggaatccggaattcaaacttgaatgcaaggatgtctagtccaacagtcatt
gaaaagctgtgtgcaacggttgagagcttgcttgattacaggtttcatgcagtctgggat
atggcttttcaaattgtttcagcgatgttcgataaattaggtgacgattctccatatttt
ctgaggaagaccctcgaggacttatcagatatgcaagatttacctgatgaaggctttcct
tatcggaagcagttgcatgtatgtgtaggatcagccgttggtgctatggggcctgaaaca
tttttgagcgttgtacgtttaaaccttgaagctagtgatctgtctgaggtaaaagtttgg
ctcttcccaatcttgaagcagtacacagttggaggacgcctgagtttcttcacagagact
atttttagaatgatagaaacaatgagccaaaaagctcaacagctcaagctacaaggtctt
cctggagcatcctggagtgttgattctctcgtatattcattatgggctttgttaccttca
ttctgtaattatcccgtggatactgtggagagttttgccgatctggggcgaatattatgt
ggagttcttcaaacacaggctgagacccgtggaattatatgcgccagtttgaatattctg
attcaacagaataaggaagttgttgaggggaaagaaatatctattaatgaagctagtcct
gctatgcaacgagcagtagctcgttatgattcacagcatgcagcagctaatttgaaagtt
ttgcggttgtgtgctccgaaattattggatcttttgtcaaggatatttcatgaatctggc
aaagatgatggcggttctcttcagtctgcgataggcaacttggcttctatagcggagaaa
aagactgtttcgaagctacttttcaagactctgcgagagcttttagaggctaccaaaact
gacattgcacaagatgaaagctctgttagtgggatggacgttgataacaccacagacaaa
aattcttcttccaactcaagggcaaggttgtttgatctattagtttcacttttacctggt
ttggatggtcaagaagttgataccatatttagttctctgaagcctgcattgcaggatcct
aagggcctaattcagaagaaagcgtacaaagttctttcaatcatcttgaagagttctgat
ggatttgtttcaaagaacctcgaggagttgcttaacctgatgcacaatctatgccatgtc
tctgccaagcgccataaacttgattgtttatacttcctgttagctcatgcatcaaggact
gatgatttaaaggagagaaaagacattgtttctactttcctacccgaagttatacttgct
ttaaaggaggtaaataaaaaaacaagaaccagagcctatgacgtgcttgttcagattggt
catgcatatgcagatgaggaaaatggtggagacaatgagcaattgcatgggtacttcaat
atggtggttggttgcttagctggggaaaaacctcagatgattagtgctgctgtcaagggt
gtagctcgtttgacatatgagttctccgatctcatagctagtgcttacaatttgcttcct
tcaacatttcttctcctccagagaaaaaataaagaaattacaaaagcaaatttaggcttg
ttgaaggttttggtggctaaatcacccgttgaaggactacacgcaaacttaaaaagcatg
gttgaaggcttattaaagtggccagaaggaacgaaaaaccttttcaaagcaaaggtgagg
cttctgttggagatgctcattaagaaatgtggcacggaagctgtcaggtctgtcatgcct
gaggaacatatgaaactcctgacgaacatacgaaagatcaaggaacgtaaagagaaaaaa
tatgcagctggttctgacataagtaaatcgcagcattcaaaagatacttcatcaaaggtt
agccggtggaatgataccaagatattttctgattttgatgatgaatacgaggacagcgat
ggagacgacatggatgcagagtctcatggccgtagcaaggcttcctctttattaaaattc
aaggcatccgttttaagatccaagaaaagtcggaaccagagtcatcttgaagtggatgag
tcggatgatgaaccgcttgacttaatggatcggtacaaaacgagattagctcttcggtca
agtgaatttcgcaaacgggaagatgactcggatgaagaagcagagtttgatgaggaaggg
cggctagtcattcgtgaaggagggagggctaaaaggaaggaaatatctgatgcagattca
gatgccaaaagtagcaaaggtagccgtttctctggaaactcatccaggaagaaccaaaag
cggatgaagacatcagagtctggatactcttacacaggaaaagagtatgcaagcaaaaag
gcaagtggtgatcttaggaggaaagataaggttgaaccgtatgcatactggccacttgat
cgcaagatgatgagccgtagaccagagcagcgggcagttgcagtcagaggtatgtcaagt
gtggtcaagatggcaaagaggatggaagggaagagtactgcagaagcacttgcaactacc
aagttcaaaaaattcaagaggagtggtcaaaagaaatctgctgggaagaagaaaaacaag
taa |