Camelina sativa (false flax): 104792595
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Entry
104792595 CDS
T05044
Name
(RefSeq) protein VACUOLELESS1-like
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
csat
Camelina sativa (false flax)
Pathway
csat04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104792595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104792595
Membrane trafficking [BR:
csat04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104792595
Hops complex
104792595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
ANAPC4_WD40
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
104792595
NCBI-ProteinID:
XP_010517084
LinkDB
All DBs
Position
6:complement(20630137..20635650)
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AA seq
858 aa
AA seq
DB search
MTNVSVAAEWQLLYDRYYRKPEIYQMRWKHVDLSRNKVACASFGGPIAVIRDDSKIVQLY
AESALRKLRIFNSAGLLHSETIWKHPGGRLIGMSWSDDQTLICIVQDGTIYRYNIHAELI
EPNMSMGKECDEQNVVECVFWGNGVVCLTEGGQLFCISDFDTMKPSKLPDVPGLTEDDML
QPTCLAVREPKYTMSGTVEVLVAVGDEIFGVEEDSVQTFRVDEPNVNDSDVQNDDYVNLI
GPVQKMIVSPNGKFLTLFTHDGRIVVVEMETKQIAIDYSCESALPPQQMAWCGMDTVLLY
WDEDLTMVGPLGDPVHYFYDEPVILIPECDGVRILSNTSLEFLQRVPDSTESIFRIGSTS
PAALLYDALDHFDRRSAKADENLRLIRSSLSEAVESCIDAAGHEFDVTRQRALLRAASYG
QAFCSNFQRERVQETCRTLRVLNAVRDPDIGIPLSIRQYKLLTPVVLISRLINSNHHLLA
LRISEYLDMNKEVVIMHWACAKITASPSTPDAHLLEVLLDKLQLCRGISYAAVATHADNC
GRRKLAAMLVEHEPRSTKQVPLLLSIGEEDTALVKATESGDTDLIYLVIFHIWQKRPPLE
FFAMIQGRVLARDLFVAYARCHKHEFLKDFFLSTGQIHEVAFLLWKESWDMGKNPMASKG
SPLYGPRIKLIEKARNLFSQTKEHTFESKAAEEHAKLLKIQHELEVSTKQAIFVDSSIND
TIRTCIVLGNNRAAIKVKTEFKVSDKRWYFLKAFALATIKDWAALEKFSKEKRPPMGFRP
FVEACIDADEKAEALKYIPKLSDLVERGEAYARIGMAKEAADAAAQANDGGELLERFRKT
FSQNAIFDTLKMPFQGAS
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacgtgtctgttgctgcggagtggcagcttctctatgatcgatattataggaag
cctgagatataccaaatgagatggaaacatgtagatttgagtcgcaacaaagtggcttgt
gcctcctttggtggtccaattgcagtcattcgagatgactccaagattgttcaactatat
gctgaatctgctcttagaaagctccgcatctttaactcagcaggtctacttcactctgag
acgatctggaagcatcccgggggacgtttgattggaatgtcctggtctgatgatcagaca
ctgatttgtattgtccaagatggtactatttatcgttacaacatccacgctgagctcatt
gagcctaatatgtcaatgggaaaggagtgcgatgagcagaatgtggtggagtgtgtcttt
tggggaaatggtgttgtctgcttgacagaaggagggcagttgttctgtatctctgatttc
gataccatgaagccttctaagttgcctgatgtgccggggttaacagaagacgatatgctt
cagccgacttgcttggctgtgagggaacctaagtacacgatgtctgggactgttgaggtg
ttggtagcagttggcgatgaaattttcggtgtcgaggaggacagtgtccaaacttttagg
gttgatgagcctaatgttaacgactctgatgtgcagaatgatgattatgtgaatttgatt
ggaccggtccagaagatgattgtatcacctaatggaaaatttctaacactcttcactcat
gatggccggattgttgttgttgagatggaaacaaaacaaattgctattgactacagttgt
gagtcagctcttcctccacagcaaatggcatggtgtggaatggatactgtgctactctat
tgggatgaggatttaacgatggtgggtcctttgggagatcctgttcactatttctatgat
gaacctgtaattcttatcccggaatgcgatggagtgagaatattatctaacacgagcctt
gaatttctccaaagagtacctgattctactgagtcaatctttaggattggaagcacatca
cctgcagctttgctatatgatgctttggatcactttgacaggcgaagtgctaaggcagat
gaaaatttgagattaattcgttcatcactgtctgaggctgttgaatcctgtattgatgct
gctggccatgaatttgatgtaactcgtcagagggctctgttacgagcggcaagctatgga
caagctttttgcagcaatttccagcgtgagcgtgtccaagagacttgtagaactttgcgg
gttctaaatgctgttcgcgatcctgatattggcatacctcttagcattcggcagtacaag
ttattgacaccagtggttttgattagtcgccttattaattctaatcaccacctccttgct
ctgcggatatctgagtacctagatatgaataaagaagtggtgataatgcattgggcatgt
gcaaagataactgcttcaccatcaactccagatgctcatcttcttgaagttttacttgat
aagctccaactatgcagaggaatatcttatgctgcagtggccactcatgctgataactgt
ggccgtcgaaagttagctgcaatgctagttgaacatgaaccacgctccacaaaacaggtt
cctcttttattaagtattggggaggaagacactgctttagtgaaagcaactgagagtggt
gataccgacctgatttatctggttatctttcatatatggcaaaagaggcctcctttggaa
ttctttgcgatgatccaaggcagagttttggcacgtgatttatttgtagcttatgcacgg
tgtcataaacatgaatttctgaaggatttcttcttatctacgggccagattcatgaggta
gcttttcttttgtggaaagaatcatgggatatggggaaaaacccaatggctagcaaagga
tctcctctgtacggtccacgcataaagttaatagaaaaagctagaaaccttttctctcag
acaaaggaacacacttttgagtctaaagctgctgaggagcatgcaaaactcttgaagata
cagcatgagctagaagttagtacgaagcaggctatttttgttgattcaagcatcaatgat
actatacgcacatgtattgtccttggtaataatcgtgctgcaataaaagtgaagacagaa
ttcaaggtcagtgataaaagatggtactttcttaaagcatttgctctggctacaatcaaa
gactgggcagcacttgaaaagttttcaaaggaaaagagaccaccaatggggttccgtcca
tttgtggaggcatgcattgatgctgatgagaaagcggaagctctaaaatacatccccaaa
ttgtcagatcttgtggaaagaggcgaggcttatgcacgtattggaatggcaaaggaagcg
gctgatgcagcagctcaggcaaatgatggaggagaattgctggagagattcaggaagaca
ttctcacagaatgctattttcgataccttgaaaatgcctttccaaggagcctcctag
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