Camelina sativa (false flax): 104792802
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Entry
104792802 CDS
T05044
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104792802
04121 Ubiquitin system [BR:
csat04121
]
104792802
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104792802
Membrane trafficking [BR:
csat04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
104792802
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104792802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
zf-HC5HC2H
zf-HC5HC2H_2
Zn_ribbon_NOB1
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
104792802
NCBI-ProteinID:
XP_010517327
UniProt:
A0ABM0ZLA0
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All DBs
Position
6:complement(21669761..21672072)
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AA seq
400 aa
AA seq
DB search
MASGSYWCYSCSRFVWVSDSISCPDCDGGFLEHIQESLDFTPSDSFHRVTTTAQHRSPTR
FPLPSSSSSMHASTADNSPTTPTTVTRTRSSNRSPNPVIVLRGSGGGGAPSSDVSQGLDR
SAFQMYYDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNNRSCDHPPASKS
AIEALPVIEIDPNHLQSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSC
PVCRHELPPAEDITDGNTGGALTVTASAEEEEDSAAGLTIWRLPGGGFAVGRIPGGWRGG
DRMMPVVYTEVDGGRLGDERLPRRVAWGSRRGGRDGSSREGGGGFAGRIMRLFGCFSGSS
GSIAAAASSGSGSRIRVTRRSSFSLFSTSSSSSRRRNWLA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcttctggatcttactggtgttacagctgtagccgattcgtttgggtttccgattcc
atctcttgccctgattgcgacggtggtttcctcgaacacatccaagaatctctcgatttc
actccttccgattcattccaccgtgtcaccaccactgctcagcatcgcagccctactcgt
ttccctctcccttcctcttcttcatctatgcacgcttctaccgccgacaacagtcccacc
actcccacaaccgtgactcgtactcgtagcagcaaccgatctcctaatcctgttatcgtt
ctccgtggatctggtggcggtggtgctccttcttctgatgtctcccaaggtttagatcga
tctgcttttcagatgtattacgatgacggtactgattctggtcttagacctttaccacct
agtatgactgagtttttgctaggttctggattcgatcggttgttagatcagatctctcag
atcgagcttaacaccaatcgtaacaatcgttcttgtgaccatcctccggcttctaaatct
gcgatcgaagctttgcctgtgattgaaatcgatcctaatcatcttcagtctgattctcaa
tctcactgcgctgtttgtaaagagaattttgttttgaaatcttccgctcgtgagatgcct
tgtaaccacatctatcatcctgattgtatccttccttggcttgccattcgaaactcttgt
cccgtttgccgtcacgagcttcccccggcggaggatattactgatggtaacaccggtggt
gctttgacggttactgcttcggcggaggaagaggaagactccgcggcggggctgactatt
tggaggttaccaggtggaggattcgctgttgggagaatccctggtggttggagaggtgga
gatagaatgatgccggtggtttacacggaggttgacggtggtagactaggtgacgagaga
cttccgagaagagtggcttggggttcgagaagaggaggaagagatggaagtagtagagag
ggaggcggtgggtttgcgggtcggatcatgaggctttttggatgttttagtgggtcatct
ggatccattgctgctgcagcatcgtccgggtccgggtccagaattcgtgttacccgtagg
tcgtcgttttctctgtttagtacatcgtcgtcttcgtcaaggagacgaaattggctagcc
tga
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