Camelina sativa (false flax): 104792947
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Entry
104792947 CDS
T05044
Name
(RefSeq) autophagy-related protein 18c-like isoform X3
KO
K22991
WD repeat-containing protein 45
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104792947
Membrane trafficking [BR:
csat04131
]
Autophagy
Other autophagy associated proteins
Others
104792947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
BCAS3_WD40
Beta-prop_IFT140_2nd
WDR55
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_IFT80_2nd
Beta-prop_TEP1_2nd
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
104792947
NCBI-ProteinID:
XP_019082294
LinkDB
All DBs
Position
6:22291199..22295378
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AA seq
348 aa
AA seq
DB search
MWCSIVKDRIRMSSTVSNPQGVLQPGGYGGHDSRSNSTSGSFVGPDSESNENEEAELVSV
SWNQDSSCFAAGTSHGFRIYNCEPFKETFRRELKNGGFKIVEMLFRSNILALVGGGPKSQ
YPSNKVLIWDDHQSRCISEFAFRSEIRSVKLRRDRIVVVLEHKIYVYNFMDLRLLHQIET
QANPRGLCCLSHHSNTSVLACPGLHRGEIRVEHFGLNMVQIINAHDSSIACMTLTLDGLL
LATASTKGTLIRIFNTMDGTRLQEVRRGVDRADIYSIALSPNVQWLAVSSDKGTVHIFSL
RVRVVGEDSHSTENAALLTQQTYSNSLQGLVSPTTELLLEQRKTPNHC
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtggtgtagtattgtaaaggatcgaataagaatgagttcaactgtttcgaatccccaa
ggggttctgcaaccgggtggttatggtggtcatgactccagaagtaacagcacttctggc
tcttttgtgggtccggattcagaatctaatgaaaacgaagaagcggagttggtttctgtc
tcttggaaccaggattcaagttgttttgctgctggaacaagtcatggttttcgtatttat
aactgtgagcctttcaaggaaacttttaggcgtgagctgaagaatggcgggtttaaaatt
gtggagatgcttttccgaagcaatatattggcgcttgttggtggtggacctaagtctcag
tacccttcaaacaaagtactgatttgggatgatcatcagagccgctgcatcagtgaattt
gcatttcggtctgagattcgttcggtgaaactaagaagggatcggatcgttgttgttctt
gaacataagatatatgtttacaattttatggacctaagacttcttcatcagattgaaact
caagcaaatccaagaggtttatgttgcctttctcatcattcaaatacatctgtgctggct
tgccctggtcttcatcgaggagagattcgagttgaacattttgggcttaacatggtgcaa
atcataaatgctcatgattccagtattgcgtgcatgaccttgacattggatggtttgttg
ctcgctactgccagtacaaagggcacgctgattagaatcttcaataccatggacggaact
cgtttgcaagaggtacgaagaggagtggacagagcagatatttatagcattgcactttca
ccaaacgtgcagtggctggcagtatcaagcgacaaggggactgttcacattttctctctt
agagttagggtagttggggaggattctcattccactgaaaatgctgctctcctgacacaa
caaacttattctaattctctgcaaggccttgtttctccaaccactgagttgcttttggaa
caaaggaagacaccaaatcattgttga
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