Camelina sativa (false flax): 104792949
Help
Entry
104792949 CDS
T05044
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104792949
04121 Ubiquitin system [BR:
csat04121
]
104792949
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104792949
Membrane trafficking [BR:
csat04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
104792949
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104792949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-RING_UBOX
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
Rad50_zn_hook
zf-Nse
DZR_2
zf-RING_16
CxC4
zf-FPG_IleRS
HypA
Motif
Other DBs
NCBI-GeneID:
104792949
NCBI-ProteinID:
XP_010517526
UniProt:
A0ABM0ZLS1
LinkDB
All DBs
Position
6:22305701..22308003
Genome browser
AA seq
328 aa
AA seq
DB search
MSSSRNTHWCHRCQRAVRLHGQEPVCSYCGGGFVEELDMPQTSPFDMFRAHSNRDVVQRD
PTFDLMDAFSAFMRNRLAERNHDREIRGRAISSGPENFPGLAPLLIFGGQVPYRLSGDNA
VEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSSIDALPTIKI
AQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSAG
GPSSSQNRTTTRNYRSSNSSSNSRENGNERRNPFSSLWPFRSSGSSSSSSTQNRGGTRNS
ETADENHNYHQQQQQQSYMGYSGWPFDY
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcagtcgaaatacccactggtgtcacagatgccagcgtgctgttcggcttcac
ggccaagagcctgtatgttcttattgtggaggtggattcgttgaagaacttgatatgcct
caaaccagcccatttgatatgtttagagctcacagtaacagggatgttgtccaacgtgat
ccaacttttgatctcatggatgccttctctgcctttatgaggaaccgcttagccgaaagg
aaccacgacagagaaatcagaggaagagccatcagttcaggtcctgagaactttcctggt
ctggctcctttattgatctttggtggtcaggtcccttatagactatctggagacaatgca
gtcgaagccctcttcaatggcggctcacctggcattggcatcacacgtggtaacaccggc
gactacttcttcggtcctggtcttgaagaattgttcgagcagctttcagctggcactact
cgccgaggccctccacccgcacctagatcatcaatagacgcattgccaaccatcaagatc
gcgcagaggcatctgaggtcatcggattcgaactgtcctgtttgcaaagacgaattcgaa
ttaggatcagaagcgaaacagatgccgtgtaaccacatctatcattctgactgcatcgtc
ccgtggctagttcagcacaactcatgcccggtctgtcgccaagagctaccatcagctgga
ggaccttcaagcagtcaaaacagaaccaccaccagaaactacagaagtagcaatagcagt
agtaacagtcgtgagaacggcaacgaaagaaggaatccgttctcatccttgtggccattt
cgttcatcgggttcaagctcaagctcctccactcaaaaccgtggaggcacaagaaactcg
gagacagccgatgagaaccataactaccatcaacagcaacagcaacaatcatatatgggt
tacagtggctggccttttgattactaa
DBGET
integrated database retrieval system
