Camelina sativa (false flax): 104793056
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Entry
104793056 CDS
T05044
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104793056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104793056
Enzymes [BR:
csat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
104793056
DNA repair and recombination proteins [BR:
csat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
104793056
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
SAP
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
104793056
NCBI-ProteinID:
XP_019082314
UniProt:
A0ABM1Q6C6
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Position
6
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AA seq
500 aa
AA seq
DB search
MSNDTAVKSIPFSINNNNSNRKDLKIVAAVTDQMGSDSDRDEMGTLQGDKKEIEAMTVQE
LRATLRKLGLPVKGRKQELVSTLRLHMDSNLPGEISGSEQKETTTSTRSASVTIKRKIRN
REEPAEDDCINSEAYGIENEEKRVKQSTKKILKAKVSSKAISKERQSLTKTGKQQFQSKK
EASSTISSEVLKTEEIISPPSQSEPWTVLAHKKPQKDWKAYNPKTMRPPSLPEGTKHVKV
MTWNVNGLRALLKLESFSALQLAQRENFDVLCLQETKLQMKDVEDIKKTLIDGYDHSFWS
CSVSKLGYSGTAIISRIKPLSVRYGTDLSGSDHDMEGRIVTAEFDSFYLINTYVPNSGDG
LKRLSYRIEEWDRTLSNYIKELEKSKPVILTGDLNCAHEEIDIFNPAGNIRSAGFTIEER
QSFGANFLDKGLVDTFRKQHPGVVGYTYWGYRHGGRKTNKGWRLDYFLVSESIAAKVHDS
YILPDINGSDHCPIGLTLKL
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatgatactgcggttaaatctatacctttctctatcaacaacaacaacagcaac
agaaaggacctcaagatagttgcagcagttactgatcagatgggaagtgatagtgataga
gatgaaatgggaactcttcaaggtgataaaaaggaaattgaggcgatgacagttcaagaa
cttagagccacattgaggaaacttggcttacctgtgaaagggcgtaaacaagaacttgtc
tcaacgttacgacttcacatggacagcaatttaccgggggaaatttctggttcagaacaa
aaggaaacgactacttccactcgttcagcaagtgtcacgatcaaaagaaagatcagaaac
agggaagagcctgctgaagatgactgcattaactctgaagcttatggcattgaaaacgag
gagaagagagtaaaacagtctactaagaaaattttgaaagctaaagtttcttcgaaagcc
atctccaaagaacgccaatcattgacgaaaacaggtaagcagcaatttcagtcaaaaaaa
gaagcatcatcaactatctctagtgaagttctgaaaaccgaagaaattatatcacccccg
agtcagagtgaaccctggactgtacttgctcataagaagccacagaaggactggaaagct
tataacccaaagacaatgagacctccctctctaccagagggaaccaagcatgtgaaggtt
atgacttggaatgttaatggattgagagcattgttgaaattagagagcttctctgctctg
cagcttgcccaaagagaaaactttgatgtcttgtgcttgcaggagactaaactccagatg
aaggatgttgaggatattaagaaaactcttattgatggctatgatcatagtttttggtcc
tgtagcgtctcaaaacttggttactctggaactgcaataatctcacggataaaaccactc
tcagttagatatggtaccgatctatctggatcagatcatgacatggaaggacgcattgtg
actgctgaatttgactccttctacttaattaatacttatgtccctaattccggagatggc
ttaaaaagactgtcatacaggatcgaagaatgggatcgaaccctcagcaattacatcaaa
gagctggagaagtctaagcctgtgatcttgacgggtgatctaaattgtgctcatgaggaa
atagacatcttcaatcccgcggggaacataagaagtgctggttttacaatagaagaaagg
caatcctttggtgcaaacttcttagacaagggcttggtagatacctttagaaagcaacat
cctggagtagttggttacacctattggggttatcgccatggtggccgtaaaacaaacaaa
gggtggagactggactacttcttggtgtccgaatcgatcgcagcaaaggtccatgattct
tacatcctccctgatattaatgggagtgatcattgccccataggcctaactctcaagctc
tga
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