Camelina sativa (false flax): 104793157
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Entry
104793157 CDS
T05044
Name
(RefSeq) RING-H2 finger protein ATL40-like
KO
K19038
E3 ubiquitin-protein ligase ATL41 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104793157
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104793157
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
104793157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-RING_5
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
Prok-RING_4
Prok-RING_1
zf-RING_4
zf-C3HC4_4
zf-RING_6
PHD
zf-Nse
Zn_ribbon_15
PHD_NSD
zf-RING_10
zf-C3H2C3
SLX1_C
RINGv
DUF1272
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
104793157
NCBI-ProteinID:
XP_010517751
LinkDB
All DBs
Position
6:23409903..23410798
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AA seq
223 aa
AA seq
DB search
MSSDNRNDDHRFDSDRSFWLSTTSYDANSKILLITIVSFSVIILIVFAYHLYARFVLRYH
RSAFQGLSFSVVSHPPKRGLDTLEIASLPKFVVGVKNDVAGMECSVCLSLLEENDTARML
PNCKHVFHVSCVDTWLTAQTTCPVCRTEVEPSPRLEPEPREGPVGDRALPLDFGAASLSD
NKIGGSPISRLDSFRRILTRERSSNSNDHSRVDQDRVLDIERQ
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgacaacagaaatgatgatcaccggttcgattccgaccgttcgttttggctg
agcacgacttcttacgatgccaacagcaagatcttactcattaccatcgtttccttctct
gttattatcctcatcgttttcgcttatcatctctacgcaagattcgttctccgctaccac
agatcggccttccaaggcctctccttctctgtcgtttctcatccgcccaaacgtggcctc
gacactctagaaatcgcttctctcccaaagttcgtggttggagtcaagaatgacgtggcg
ggtatggaatgttcggtttgtctcagcttgttggaagagaatgatacagcgaggatgtta
ccgaattgcaagcacgttttccacgtaagttgcgttgacacgtggctcacggcgcagacc
acttgtcccgtgtgtagaactgaagtcgagccaagtccaaggcttgagcctgaaccaaga
gaaggtccagttggcgaccgtgcactaccgttggattttggggcggcatctttgtcggat
aacaaaattggcgggtcaccaatttcgcggttagattcatttcggaggattctgacaagg
gaaagatcttcgaacagtaatgatcattctcgcgttgaccaagatcgtgttttggatata
gaacgacagtga
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