Camelina sativa (false flax): 104793324
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Entry
104793324 CDS
T05044
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Module
csat_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104793324
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104793324
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
104793324
NCBI-ProteinID:
XP_010517966
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Position
6:complement(24237079..24239001)
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AA seq
388 aa
AA seq
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MVSLLVISVFFFFFLFISSCFAQSYNVLSFGAKPDGKTDATEAFMAVWETACASSRPVTI
VVPKGRFLLRSLNFDGSKCKSKPVTFRIDGTLVAPADYQVLGNEDYWIFFQHLDGVTVYG
GVLDARGVSLWDCKKSGKKCPSGATTIGFQSSSNVVVSGLTSLNSQMFHIVINGCNNVKL
QGVKVLAAGNSPNTDGIHVQSSTTVSIFNTKISTGDDCVSIGPGTNGLWIENVACGPGHG
ISIGSLGKDSVESGVQNVTVKTVTFTGTDNGVRIKSWARPSSGFAKDIRFQHCVMDNVEN
PIIIDQNYCPDHNCPVQVSGIKISDVLFVDIHGTSATEVGVKLDCSSKKPCTGIRLEDVK
LTYRNKPAASACAHAGGIEAGFFQPNCL
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggtttcacttctagtcatctccgtcttcttcttcttcttcctcttcatctcatcttgt
tttgctcaatcctacaatgtcctgtctttcggagctaaaccagacggaaagacagacgca
accgaagcgttcatggcggtttgggaaaccgcttgtgcatcgtctcgtcccgttaccatt
gtggttcccaaaggtcggttcttgttaagaagccttaatttcgacggttcaaagtgcaaa
tccaagcccgttacgttccgtatcgacggtacattggtggctccggctgattatcaagtt
ctcggaaatgaagactattggatattcttccagcatctcgacggcgtcaccgtatacggc
ggagttcttgacgctcgaggagtttctttatgggattgtaaaaaatccggaaagaaatgc
cccagtggtgcaacgaccataggatttcagagctcaagcaacgtcgtggtctctgggctg
acgtcactcaacagccagatgttccacatcgtcataaacggttgcaacaacgtgaagcta
caaggagtcaaagtattagctgccggaaacagccccaacacggacggtatccacgttcag
tcttccaccaccgtctctatcttcaatactaaaatctccactggcgacgattgtgtctcc
atcggtccaggcactaacggactatggatcgaaaatgtagcatgcggccctggtcatggc
atcagcattggtagtttgggaaaagatagcgtggagtcaggtgtacagaacgtgactgtt
aaaacggtgacgtttacgggaacagacaacggagtgaggatcaaatcatgggccagaccc
agtagtggattcgctaaggacatccgtttccaacattgtgtaatggacaacgtagagaac
cctatcatcattgaccaaaactactgtcctgatcacaattgtcctgtccaggtttcgggg
atcaaaatcagcgatgtgttgtttgtagatatacatggaacatcagcgaccgaagttgga
gtgaaacttgattgtagttctaagaaaccctgtaccggaatacgacttgaagacgttaaa
ttaacataccggaataagccagcggcgtcggcttgtgctcacgccggaggaatagaagct
ggattttttcagccaaattgtctatga
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