Camelina sativa (false flax): 104793635
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Entry
104793635 CDS
T05044
Name
(RefSeq) uncharacterized protein LOC104793635 isoform X1
KO
K24155
rabconnectin-3a
Organism
csat
Camelina sativa (false flax)
Pathway
csat04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
104793635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104793635
Membrane trafficking [BR:
csat04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
104793635
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
104793635
RAVE complex
104793635
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40_Prp19
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
ANAPC4_WD40
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
104793635
NCBI-ProteinID:
XP_010518332
UniProt:
A0ABM0ZNQ4
LinkDB
All DBs
Position
6:complement(25637676..25647801)
Genome browser
AA seq
2494 aa
AA seq
DB search
MPETTSHDAISPVTDPIDNLPLRQLRSEIVPPAPTRSQSSIDWLPDFAGYSWLAYGASTL
LVISHLPSPLRGDDSTTAPFFRQILEVSGDVSSPVTSVSWSPVTPSLGELAVGSGNYIYL
FALDFNGSFCWSQNSILVQETKVEAIEWTGSGDGIIVGGTDIVLWKRRNQSWEIAWKFSG
DHLQDLVSSTWSFEGPFATATSWSKFPAECDEAGQSVLAYYSDGVSYHTFELPHPQRISM
IQWRPMAAEQSAIGIGKSLRNVLMTCCLDGAVRLWIEVDGGKTKKGMKDVSDHKKSFCVA
AVIEINHVFDGCLGRDIFLFWGTRTGGILKTIEGTNQYFSMEKYDHEIVGKCEWLVGYGP
GNLATLWAVHCLDDVSPMRFPRVTLWAREESSEIGSGSLSLANASGSSDRLPLKKVSLLR
NNLHGTPLICSSIYLSPQNTVYWSSLHTIKSHDSEDPSPNKSSLLKCINGKVLYLDGHGG
KILQVAFDPFICEAGYTASLDSNGLIIIWSSSAYLNHAIDHPISVSSWKPCGRLQNLRLK
YTCLCWASSSLEDERFLLVGHVEGVDCFSVRNCGKDDDGYLTHYICTIPFAVNSPLQSGP
TSIFARNLSNSCGKTFKSNRFLLLSVWMKEKRVDALSWSVTLHHFDVAGSTCDCHFHDFD
SIGLGKWLFKDNFAGKTNCIAVRSCSSEIPESHRDDEVTSFAVVTSGRALENDVNSEIQG
YTMATGQADGSLKLWRSNLQESSTPSLPWELVGMLTIGQNPVSAISLTDSGHKIAAVCIE
NHSKAVRTISIWEIRHLVDSGVFILEHTLHFDAEVVAVRWSTTGSDQLLLEVCTEKELRV
YGMARQPCKSTNLAVSDYSSEAQIWQCFAVTRTFSVIHDLWWGSIAKTCLVHNDYISLHG
QWLAVVDEKRKINNYPHIFSANLPNVVYATEEGRDSELLSDSSTNDIKEPDTASISRGCI
PQLSTSNATDDGQVKSMSLIGTAYGSDTINDITSMGHIVEKLGGALPLNHPQALLVAIRS
GNWKRASAALRHLAEYISSSDASEKGAVKSVLCPDVLLSIYYEGSLSNGPNRKDFQWGGT
SGSVIQNSQSQSGLQSSSFFNMEFYSPNSSYSSPATDLQFSGFCEQLKKLSDEGNISRIE
KLQYFAIVDLLCEISNPHSTSVYASLDEAGRRFWVSLRFKQLFLARSSGETSSLEELDVD
SSMIGWAFHSESKENLSGSLLPNESSWLQMRSLGFGFWYSNVAQLRLRMEKLARQQYLKK
KNPRDCALLYIALNRVQVLAGLFKLSKDEKDKPLVVFLSRNFKEEKNKAAALKNAYVLMG
KHQLELAMGFFLLGGEASSAINVCVKNLQDEQLALVICRLVDGQGGALESNLINKYILPS
AVQRGDFWLSSILKWELGEYHQSILAVAGCLGNPVSRSSTVSSNHISFVDPSIGLYCLML
ATKNSVKNALGEKSSSTLSRWATLMAATAFSRCGLPLEALECLSTSAIGHGGTHHQTSVP
SNGQLRTPEDVLEHSVPHSSNWVSSGISSTVDTHFKLGLAVQFLSRLLREASAPFMNSEI
VSCEKLSRFQHKLQTALELFYQRFSLSSSYLRDTIILSAYNRGLLSMGHNIFQENSSSGL
SDDKSHTDEDLIQYSALPKLILKATEEKSFELARIIAACSVTCLHSMPCFEENKVSSGPE
PKWSNALRFHFQGILESFSSLRTSIRLCLGSSVVDLETRLTVVLDLVEYCSRLAIAWVLG
DVNCLFRMVQPLTIAYFHGHMSYEVDMESVKRVYHHEASVSVPDASDVEVNFKVSRDVGN
NEIGYPVYSIPEDERLLVTQACFWKHVSDFVKHKLVSVSINVDGGIPNSGSSENVDAQAS
LDSSDDIVGVTEKIMSVLGKTLINTLDQLSSYHVKQLVLVLKQKIEKRIQVPTLLWLLEC
GKSQANFRNRDIPDARIENEDNGDLAVTVRFWNLCVDPHLLYEAFLLENFDISEWSKSKP
LEDWSDMYREVTRKNGLDMPCNQDGRSSNDVASLASHASNSSQKAAITASENSAFQNPKE
IHKRTGELIEALCINAINHRQAALASNRKGIIFFNLEDGGSCTNQSDYIWSNADWPHNGW
ANSESTPVPTCVSLGVGLGDKKGAHLGLGGATVGVVSLSKRGKNHRVPGYTGLGVSGLGW
ETQEEFEHFVDPPPTVETVITRAFSSHPTLPLFLVGSSNTHIYLWEFGKDRATATYGVLP
AANVPPPYALASISAVQFGPCGHRFASAALDGTVCTWQSEVGGRSNIHPVESSLCFNGHA
SDVEYISSSGSIVAASGYSSSGANVVVWDTLAPPSTSQASINCHEGGARSISVFDNDIGS
GSISPMIVTGGKNGDVGLHDFRYIATGKMKKQRNPDGRSSTDGDQNKNGMLWYIPKAHLG
SVTKISTIPHTSLFLTGSKDGEVKLWDAKAAKLIHHWPKLHERHTFLQPNSRGYGAIIRA
GVTDIQVCPNGFITCGGDGTVKFVSLRDSYDDGK
NT seq
7485 nt
NT seq
+upstream
nt +downstream
nt
atgccggagacgacgagtcacgacgcgatctcaccagtcacagatccgatcgataatttg
cctctccggcaactcagatcggagatcgttccaccggctccgactcgatctcagtcttct
attgactggcttcccgacttcgctggttactcatggctcgcttacggagcatccactctc
ctcgttatctctcatttaccttctcctctccgcggcgacgattccacgacggcaccattt
ttccgtcagattctagaggtttccggcgatgtttcgtctccagttacttccgtttcttgg
tctcctgtaacgccgtctctaggcgagctcgctgttggctctgggaactatatctacctc
ttcgcgcttgatttcaatggttctttttgttggagtcagaattccatattggtgcaagaa
acaaaagttgaagcgattgagtggacaggatccggggatgggatcatagttggtggaact
gatatcgttctgtggaagagaaggaaccaatcttgggaaatagcttggaagttctcgggg
gatcaccttcaagatctggtttcctccacctggtcgtttgagggtccttttgcgacagca
acttcttggagcaaatttccagctgagtgtgacgaagcaggtcaaagtgttttggcctat
tatagtgacggagtatcatatcatacattcgaattgcctcatcctcagagaatatccatg
atccaatggaggccgatggctgcagaacagtctgcgataggtatagggaaatcattgagg
aatgtgctaatgacatgttgcttggatggggcagtaaggttatggattgaggtagatggt
ggaaagacgaaaaagggcatgaaagatgtatctgatcataagaaatcattttgcgtggca
gctgtaatagagataaatcacgtcttcgatggctgtttgggcagagatatatttcttttt
tggggaactcgtacagggggtatattgaaaaccattgaaggtactaatcaatatttttct
atggaaaaatatgatcatgaaatagttggcaaatgtgagtggttggtagggtacggccct
ggaaatttggctactctgtgggctgtccattgtcttgatgacgtctctcctatgaggttt
ccccgagtaacattgtgggcgagagaagaatcaagtgaaattggttcaggatcactctct
ctagcgaatgcttcaggttcttctgatcgattacccctgaagaaagtttctctattgaga
aataaccttcatggcacaccacttatctgctcgtcgatttatttatctccgcagaatact
gtgtattggtcttccttgcacacaataaaatcacatgactcagaagatccatccccaaat
aaatccagtttattgaagtgcattaatggaaaagtattatatcttgatggtcatggtggg
aaaatcctacaggttgcctttgatcctttcatatgtgaggcaggatacactgcttccctg
gattctaatggtttaataataatctggtcctctagtgcttatttgaaccatgctattgac
catcctatttcagtttcctcttggaaaccttgtggacggctacagaacctaagattaaag
tacacatgtttatgctgggcatcttcgtcattggaagatgagagatttctgcttgtgggg
catgtagaaggggttgattgctttagtgtaaggaattgtgggaaagatgatgatggttat
ctgacccattacatatgtaccattccgtttgcagtaaacagccctttgcagagtggtccg
accagcatatttgcaagaaatctatctaattcttgtggaaagacattcaaaagtaaccga
tttttgctactgagtgtctggatgaaagagaaacgggttgatgctctgtcatggagtgtg
accttgcatcattttgatgtagcaggaagtacctgcgattgtcattttcatgattttgat
agtattggattaggaaagtggttattcaaagataattttgctggtaagacgaattgcatt
gctgttagatcatgctcttcagaaatacctgaatctcaccgtgacgatgaagttacgagt
tttgctgtggtcacaagtggtagggctctagagaatgacgtgaacagtgaaattcaaggt
tatactatggcaactggtcaagctgatggctctttaaaactttggagaagtaatttacag
gaaagttcaacaccttcccttccgtgggagcttgttggcatgcttaccattggccaaaat
cctgtcagtgctatatctctgactgattcgggacacaagatagcagccgtctgtatagag
aatcattcaaaagctgtccgcacaattagtatatgggagattagacaccttgtagattca
ggggttttcatactagagcatacgttacattttgatgcagaggttgttgctgtaagatgg
tcaactacgggtagtgatcagctattgcttgaagtttgcacagagaaggagttgcgggtg
tatggtatggctcggcaaccctgcaaaagtaccaatttagcggtctctgattattcttca
gaggcacagatttggcaatgcttcgctgttactcgtactttttctgttatacatgattta
tggtggggatccatagcgaagacttgccttgttcataatgattatattagtctacatggt
caatggctggctgttgttgatgagaagcgaaagatcaataactatccacacatattttca
gccaatcttcccaacgtagtatatgctaccgaagaaggcagagactctgaattgttatct
gattctagtactaatgatattaaagaacctgatactgcatctattagcagaggatgtatt
cctcaactttcaactagtaatgcaactgatgacgggcaagtcaaaagtatgtcgttgatt
gggaccgcatatggttcagatactattaatgacattacaagcatgggacatatagtggag
aagttaggaggtgccttaccacttaatcaccctcaagcccttcttgtagctatacgttca
ggcaattggaaacgtgcaagtgcagctctaaggcatcttgctgaatatatcagttcgagt
gatgcctccgagaagggtgctgtaaagtcagttctttgtccagatgtccttttgtcaata
tattatgaagggtctctctccaatggcccaaatcgtaaggatttccaatggggtgggaca
tctggttcagtgatacagaattcacagtctcagtcagggttgcagtcatctagtttcttt
aatatggaattttatagtcccaacagtagttacagttcacctgcaacagacttgcaattt
agtggcttctgcgagcagctgaagaagttatcagacgaaggaaatatttccaggatagaa
aaattgcaatattttgcaattgttgaccttctttgcgaaataagtaacccacattctaca
tctgtctatgcaagtcttgatgaagctgggagaagattttgggtctcacttaggtttaaa
cagctgtttttggctagaagttctggggaaacatcatctttggaagagttggatgttgac
tctagtatgatcggatgggcttttcactcagagtccaaagaaaatttatctggttctctt
ttacctaatgaatcatcatggctacaaatgcgatcacttggttttggcttttggtattca
aatgtagcacaactgcgtttacgaatggagaaactggcccgacagcaatacctgaagaaa
aagaatcctagagattgtgctcttctctatatagctttaaatagagttcaagttttggct
ggtcttttcaaattaagcaaagatgagaaagataaacccttggtggtttttctttcacgc
aattttaaggaggagaaaaataaggcagcagccttgaaaaatgcatatgtgctgatgggt
aaacaccaactggagctggcgatgggtttctttctccttggaggtgaagcttcatctgca
ataaatgtttgtgtgaaaaatcttcaggacgagcagcttgctctcgtaatttgccggctt
gtagatgggcaaggtggggccctggaaagtaatcttataaataaatatatacttccatct
gctgttcagagaggagatttttggctatcaagcattcttaagtgggaattaggagagtac
caccagtcaattcttgctgtggctggatgtttagggaaccctgtttctcggagctccacc
gtttcttcaaatcacatctcgtttgtggatcctagtattggcctttactgcctcatgttg
gcaaccaaaaatagtgtgaagaacgcactgggggaaaaaagttcttcaactcttagtaga
tgggcaaccttgatggctgctaccgccttcagcagatgtgggctcccgctcgaggcgtta
gaatgtctttcaacatctgccattggtcatggtggtacccatcatcagactagcgttcca
agtaacggtcagttgcgtacaccagaagatgttcttgagcattctgttcctcattcgtcg
aattgggtatcaagcggtatttcatctactgtggacactcattttaaattgggtttagcc
gtccagttcctctcaaggcttttacgggaagcaagtgcaccgtttatgaattctgaaatt
gtttcatgtgagaaactctcacgatttcagcataagctccaaacagctttggagctattt
taccaaagattttcgctgtcttcatcttacctacgtgatacgattattttgtcagcatac
aaccgtggcttactatccatgggacacaatatatttcaggaaaatagttcctcaggactc
tcggacgacaagtctcacacagatgaagatctcatccaatattcagctttacctaaattg
attctaaaagcgactgaagagaaatcatttgaattagcacgtatcattgctgcgtgcagt
gtcacttgcttacactcaatgccatgctttgaggaaaacaaggtgtcatctggtcctgaa
ccaaagtggtccaatgctttgcgatttcactttcagggaattctggaatcgttctctagt
ttaagaacatctataaggctgtgcttgggctcctctgtggtagacctggaaacaagactc
acagttgttcttgatttagtcgaatattgctcgagacttgcaatagcttgggttctggga
gatgtaaattgtctctttcgaatggttcagccccttacgatagcatattttcatgggcat
atgtcttatgaggttgacatggaaagcgtgaagagagtataccaccatgaagcctctgtt
agtgttccagatgcatcagatgtagaggttaattttaaggtcagcagagatgttgggaat
aacgaaattggctatccggtgtactcaattccagaagatgaaagacttcttgtaacacaa
gcatgtttctggaagcatgtttcagactttgtgaaacataagctggtatctgtttcgatc
aatgtagatggtggtatcccgaatagtggttcctctgaaaatgttgatgctcaggcatcg
ttggactccagtgatgacattgtaggtgtaacagagaagataatgtctgttctgggaaaa
acactgattaacacccttgatcaactctcttcctatcatgtcaaacaactagtattggtc
ttgaaacagaaaatagagaagagaattcaggttcctaccttgttatggctgctcgaatgt
gggaaatcacaagcaaattttcgtaatcgggatatcccagatgcacgtatagagaatgaa
gacaacggcgacctagctgttactgtgaggttctggaatctttgtgttgatcctcattta
ctgtacgaagctttcttgctagaaaattttgacatatctgagtggtcaaaatccaaacca
ttggaagattggagcgatatgtacagagaagttaccaggaagaatgggctcgacatgcca
tgcaatcaagatggtcggagtagtaatgatgtggcttctcttgcaagccacgcttcaaat
tcttcacagaaagctgcaataactgccagtgaaaactctgctttccagaaccccaaagaa
atccataagaggaccggggagcttatagaggccctttgtatcaatgccatcaaccatcgg
caagctgcattagctagcaaccgcaagggaataattttctttaacctagaagatggtggt
tcctgcacaaaccagtcagactatatctggtcaaatgctgactggccacataacggttgg
gctaactctgagtcaactccagttccaacatgtgtctcacttggtgttggtcttggggac
aagaaaggagcacaccttgggttaggcggggccactgttggagttgtttctctttccaag
cgtgggaaaaatcacagagttccgggttacacgggcttaggagtctccggtctaggttgg
gaaactcaagaagaatttgaacactttgttgatcctcctccaacagttgaaactgttatt
acgagagcattctccagtcacccaacattgcctctcttcttggttggctcgagcaacaca
cacatttacttgtgggagtttggaaaagacagagccactgcaacttatggtgttctgcct
gctgcaaatgttcctccaccatatgctttggcgtcaatatcagcggtgcaattcggtcca
tgcggacaccgatttgctagcgctgcactggatggaactgtatgcacttggcaatcagaa
gttggaggaagaagcaatatccatcctgttgagtcatctctttgcttcaatggccatgca
tcagatgtagaatatattagttcgagtggatccattgttgcagcctcaggatatagctca
agtggtgcaaacgtcgttgtatgggatactctagctccgccttcaacctcccaggcatct
atcaattgtcatgaaggtggtgcacgctctatctcagtattcgataatgacattggtagt
ggctcaatttctcctatgattgtgactggtggcaaaaacggcgatgttggtttgcacgat
ttccggtatattgcaaccggaaagatgaagaagcaaaggaaccctgacggaagatcttcg
actgatggagatcaaaacaagaatgggatgctttggtacataccaaaggctcacttaggg
agtgtgacgaaaatatcgacaatccctcacacaagtctgttcttgacgggaagcaaagat
ggagaagttaaactgtgggatgcgaaagcagcaaagttgatacatcattggccgaaacta
cacgaaagacacacttttctgcagccaaactccagaggctacggtgcaatcatccgggct
ggggtgactgacatacaagtttgtccgaatggatttataacgtgtggtggtgatggcacg
gtgaagttcgtcagcctcagagattcctatgacgatggtaaataa
DBGET
integrated database retrieval system
