Camelina sativa (false flax): 109124401
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Entry
109124401 CDS
T05044
Name
(RefSeq) probable serine/threonine protein phosphatase 2A regulatory subunit B''delta isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109124401
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
109124401
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
109124401
03036 Chromosome and associated proteins [BR:
csat03036
]
109124401
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
109124401
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
109124401
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
109124401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
109124401
NCBI-ProteinID:
XP_010511184
LinkDB
All DBs
Position
5:complement(21056054..21059399)
Genome browser
AA seq
535 aa
AA seq
DB search
MESITLDIELLQLPETSPVSMKSNQDFVKKLFDQWLALPETNRLVTSLVNDAKAGVALNV
MCGGGSLGSNSGSNSPLASMFPARNRPPLSPRNSTGSPRITRQRTGLSNLSSPLKVVSDH
VKELIPQFYFEDGRPPPNDLKEQCIAKINSLFYGHEDGLQIQEFKLVTTEVCKVPSFFST
SIFKKVDTNNTGFVKREAFIDYWVKGNMLTKEITSQIFTILKQPDHKYLVQDDFKPVLQE
LLATHPGLEFLQGTPEFQDRYAETVIYRIYYYINRSGNGHLTLRELKRGNLVDAMQHADE
EEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYSNHALTYRIVDRIFSQVP
RKFTSKTEGKMGYEDFVYFILAEEDKSSEPSLEYWFRCIDLDANGVLTRNELQFFYEEQL
HRMECMAQEAVLFEDILCQLFDMVKPEDEGYICLNDLKGSKLSGNVFNILFNLNKFMAFE
TRDPFLIRQERANPTWTEWDRFAHREYIRLSMEEDVEDASNGSAEAWDDSLEVPF
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggagtctataacgcttgatatagagctgttgcagttacctgagacatcaccagtgtca
atgaaatctaatcaagattttgttaagaagctctttgatcaatggcttgcccttcctgaa
accaatcgcttggttacatctttggtaaatgatgcaaaggcaggagtggctttgaatgtt
atgtgtggaggaggctctttgggctcgaattcagggtctaatagtccattggcttcaatg
tttccggcacgtaacaggcctcctctttctccaaggaactcaactggttcgcctcggatc
actagacaaaggactggtctttctaatcttagctctcctctcaaagttgtttctgatcat
gtcaaagagctcattcctcagttttactttgaagatggtcgcccaccaccaaatgatctg
aaagagcagtgtatagctaagatcaatagtcttttttatggccatgaggacggtttgcaa
atccaagaatttaaattagtcactactgaggtctgcaaggtcccatcatttttttccacc
tccattttcaagaaagttgataccaataacactggttttgtgaaaagagaagccttcatt
gattattgggttaagggaaatatgttgacaaaggagataacaagtcagatatttacaata
ctgaagcaaccagatcacaagtaccttgtccaggatgatttcaagcctgtgctccaagaa
ctattagcaacacaccctggtcttgaattcttacaaggcacacctgagtttcaagataga
tatgctgaaactgtaatatacagaatatattactacataaacagaagtgggaatgggcat
cttaccttgagagagcttaagcgaggaaatctagttgatgcaatgcagcatgccgatgaa
gaagaggacatcaataaggttttgaggtacttctcgtatgaacatttctatgtcatatac
tgcaagttctgggagctggatacagaccatgatttcttgatcgacaaagagaatctcatc
cgatatagtaaccatgcactcacctacagaattgtcgaccgaatcttctctcaggtaccc
aggaagtttactagtaaaaccgaaggaaaaatgggatatgaggattttgtttacttcata
ttggccgaagaagacaagtcatcagagcctagtcttgagtattggttcaggtgcatagat
ttggatgcaaatggagttttgacgcggaacgagctgcaattcttttacgaggaacagctg
catagaatggagtgcatggcgcaagaggcggtgctgtttgaggatattttgtgccaatta
ttcgacatggtcaaaccagaggacgaagggtacatttgtctgaatgacttgaagggttct
aagctctctggaaatgtgttcaacatacttttcaacctcaacaagtttatggcgtttgaa
actcgcgatcccttcctcatccgccaggagcgggcaaatccaacatggacggagtgggat
cgttttgctcatagagaatatattaggctatcaatggaagaagatgtagaagatgcttct
aatggaagtgctgaagcatgggacgactcacttgaggtccccttttga
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