Camelina sativa (false flax): 109124424
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Entry
109124424 CDS
T05044
Name
(RefSeq) chaperonin 60 subunit beta 1, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109124424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
109124424
03110 Chaperones and folding catalysts [BR:
csat03110
]
109124424
03029 Mitochondrial biogenesis [BR:
csat03029
]
109124424
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
109124424
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
109124424
Messenger RNA biogenesis [BR:
csat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
109124424
Chaperones and folding catalysts [BR:
csat03110
]
Heat shock proteins
HSP60 / Chaperonin
109124424
Mitochondrial biogenesis [BR:
csat03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
109124424
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109124424
Exosomal proteins of other body fluids (saliva and urine)
109124424
Exosomal proteins of breast cancer cells
109124424
Exosomal proteins of colorectal cancer cells
109124424
Exosomal proteins of bladder cancer cells
109124424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
109124424
NCBI-ProteinID:
XP_010501159
LinkDB
All DBs
Position
3:complement(27938137..27942206)
Genome browser
AA seq
600 aa
AA seq
DB search
MASTFTATSSIGSMVAPNGHKSDKKLTNKLSSSSFGRRQSVCPRPRRSSSAIVCAAKELH
FNKDGTTIRRLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDP
VENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAK
ALVAELQKMSKEVEDSELADVAAVSAGNNEEIGNMIAEAMSKVGRKGVVTLEEGKSAENN
LYVVEGMQFDRGYISPYFVTDSEKMSVEFDNCKLLLVDKKITNARDLVGVLEDAIRGGYP
ILIIAEDIEQEALATLVVNKLRGTLKIAALRAPGFGERKSQYLDDIAILTGATVIREEVG
LSLDKAGKEVLGNASKVVLTKETSTIVGDGSTQDAVLKRVTQIKNLIEQAEQDYEKEKLN
ERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKV
DAIKATLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNVKFGYNAATG
KYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPVGNPMDNSGYGY
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaacattcactgccacgtcttccattggttcaatggttgctccaaatggtcac
aaatctgataagaaacttaccaacaagttgtcttcaagctcatttggaaggaggcaaagt
gtgtgtcctagacccaggagatccagttctgctattgtatgtgcagccaaggaattgcat
ttcaacaaagatgggactaccataaggagacttcaagctggtgtcaacaagcttgcagac
cttgttggtgttacacttggacccaaaggacgaaatgttgttcttgagagcaagtatgga
tcaccaagaattgttaatgatggtgtgactgttgcaagagaggttgagctggaagaccca
gtcgagaacattggtgctaagcttgtgaggcaagcggctgccaaaaccaatgacttggct
ggtgacggtacaacaacatctgttgttcttgcacaaggttttattgctgagggtgtcaag
gtggtagctgcgggtgcaaaccctgttttgatcaccagaggtattgagaagacagcaaag
gctttggttgccgagcttcagaaaatgtctaaggaggttgaagacagtgaacttgcagat
gttgcagctgttagtgcaggtaacaacgaagaaattggaaatatgattgctgaagcaatg
agcaaagtgggcaggaaaggtgtggtgacccttgaggagggtaaaagtgccgagaacaac
ctctacgtcgtagaaggaatgcaatttgatcgtggttacatctccccttattttgtgaca
gacagcgagaaaatgtccgtcgagttcgacaattgcaagttacttctcgttgacaaaaaa
attaccaatgcaagagatcttgttggtgttttggaggatgcaattagaggtggataccca
atattgataattgcagaagacattgaacaagaagcactagcgactcttgttgtgaacaag
cttagaggtacattgaagattgcagctctcagagctccaggatttggagagcgcaagagc
caataccttgacgatattgccattctaactggagcaactgtgatccgagaggaagttggt
ctttcacttgacaaagctggaaaagaagttcttggtaatgcctcaaaggtcgtcctcaca
aaggagacttctaccatagtgggtgatggaagcacacaggatgcagtgctaaagcgtgtt
acacagattaaaaatcttattgagcaagcggagcaagattatgagaaggaaaagctgaat
gagagaattgcaaagctctctggtggagttgctgtgattcaggttggagcacaaactgag
acagaactcaaagagaagaagttgagagttgaagatgctcttaatgcaacaaaggccgct
gtggaggaaggtattgttgttggtggtggttgcactctgcttcgtcttgcttccaaggtc
gatgccattaaagccactcttgacaatgatgaagaaaaggttggagctgatatagttaaa
agagcactgagttatcccctaaaactgatcgccaaaaatgctggtgttaatggaagcgta
gttagcgagaaggtgctttccaacgacaacgtgaaattcggttacaatgctgcaaccggc
aagtacgaggatttaatggctgcaggaatcatcgatccaacgaaggttgtgagatgttgc
ttggaacacgcagcttcggttgcaaagactttcttgatgtcggactgtgttgttgttgag
atcaaggaacctgaaccagttcccgtcggcaacccaatggacaactcaggatatggatac
tga
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