KEGG   Camelina sativa (false flax): 109124452
Entry
109124452         CDS       T05044                                 
Name
(RefSeq) protein SMG7 isoform X1
  KO
K14409  protein SMG7
Organism
csat  Camelina sativa (false flax)
Pathway
csat03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    109124452
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    109124452
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     109124452
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109124452
SSDB
Motif
Pfam: EST1_DNA_bind EST1 Rhamno_transf Coleoptericin
Other DBs
NCBI-GeneID: 109124452
NCBI-ProteinID: XP_010492997
UniProt: A0ABM0XYX4
LinkDB
Position
20:10145249..10150484
AA seq 1029 aa
MMTLQMDNTTASSSRERAKSLFDKTIELENKRWKAVQDRNPFDLNLWHQIRENYEAILFE
DHAFSEQHNIELILWQLHYKRIENCRGHINAFLSSSSSSAAHNVKGPSRLDQLAKLKLQF
RTLLSEATGFYHDLISKIRSKYGLPLGYFSEDQASQNMADKDGKKLAEVKKGLVSCHRCL
IYLGDLARYKGLYGEGDSKNREYAAASSYYLQAASLWPGSGNPHHQLAIIASYSSDEFAL
TYRYFRSLAVESPFPTARDNLIVAFEKNRQIYAQLFVASKDTSKKPIGKGRGKGRGKGED
TSSKDANLVAGPEKDKVTSAKDMLKAFCIRFVRLNGILFTRTSLETFLDVLTSTSSSLRE
VISSGSMEELSLGIDTSDSALFIVRLVAIMIFSVHNSKKETEGQSYAEIVQRVEPARNSL
TASFELLGHIVEQCVQLRDPSASYFLPGVLVFVEWLACCPDIALGSDPDDRQTTVRNRFW
NQCVTFFNQILSLGPLFIDDVEDETCFSNMSLYDERETENRLALWEDYELRGFLPLLPAQ
TILDFSRKHSFGTEGPKEKKARIKRILAAGKALTSVIKVDQNHVYYDSKKKKFLVGVKPS
DDLLDSHSSPPKADALQDNQVMVKHNSPVMQQDQQICMGEEDDDEVIVFKPLVTEKRKEA
SDQIYVSNGGFRKPDQVATTENLKPLSGVDSAFHENQFLQARGNASIQVPASIGSNLLGL
LQASTQSQASHLQQVQTQAVNPQSAQSLAAARLQPIQSQVAQLQPLPSRVVHFQQTQAPL
SHVSLVQSQSASLGGGTKWLPEEAASLASSQSSFAQMGNGHVMRNEIQGNHGVSYHPAHS
LPVYQSYNVNGMGGMPSQSRTSEAVFPPKSDTVSSSGVIADGLGVQSSIARKNPISRAFR
HLGPPPGFNTVPSKLQKEPVPGSDLSGNNLAVDDYRWLDGYETQSSRGAGLNSSLNYASK
SEQMGTSNGMNGAANFPFPGKQIPTSQVQADLPYFQNPQKDSFVNQNHQSAQLPEQYQGQ
STWSSRHFV
NT seq 3090 nt   +upstreamnt  +downstreamnt
atgatgactttgcagatggataatactactgcttcctcctcaagggagcgagccaagtcc
ttatttgacaagactattgagttagaaaacaagcgttggaaggctgttcaggatcgaaat
ccatttgaccttaatttgtggcatcaaattcgtgagaattacgaagcaatactttttgaa
gatcatgccttttccgagcagcacaacattgaacttatactgtggcagctgcattacaaa
cggattgaaaattgtagaggacacatcaatgctttcttgagttctagtagctcgagcgcg
gcacacaatgttaagggtccttctagactcgatcaacttgcaaaactgaagctgcagttc
aggacattactttcagaagcaactgggttttaccatgatttgatctcaaaaattagatcc
aagtatggccttcccttgggttatttttctgaggatcaagcgagtcaaaacatggctgat
aaagatggaaagaagttagcagaagttaaaaaaggcttggtatcttgtcatcgttgctta
atataccttggtgatctggctcggtataaaggattgtatggggagggggattccaagaac
agagagtatgctgctgcttcaagttactatttgcaagcagcttctctatggccaggcagt
ggaaacccacatcatcagcttgctatcattgcttcttattcgtcggatgagtttgcatta
acatatcgttacttccggagtttggctgtggagagtcctttcccaactgcccgtgataac
ttgattgttgcttttgaaaagaatcgtcagatttatgcccaattgtttgtggcttccaaa
gacacatctaagaagccgattggtaaaggaagaggtaaaggaagaggtaaaggtgaagat
acttcatcgaaagatgcgaacttggtagctggtcctgagaaggataaagtaactagtgca
aaggacatgctgaaagcattctgcattagatttgttcgtctcaacgggatactttttacc
cgaacaagcctggagacgttcttagatgtgcttacctctactagcagcagtttacgagag
gtaatttcttctggctcaatggaagagctgagtttgggaatagacaccagtgacagcgca
cttttcattgtcagactcgtggcaatcatgatatttagcgtccataactcaaagaaagag
acggaaggtcagtcgtatgcagaaattgtacagcgtgtggagcctgccagaaactcttta
acagctagttttgagttgcttggacatatagtagagcagtgtgtgcaactgcgtgatcct
tcagcaagttacttccttccaggggtcttagtttttgttgaatggttggcctgctgtcct
gacattgctctaggaagtgatccggacgacagacaaactactgtaagaaatagattttgg
aaccagtgtgttaccttcttcaatcagatcttgtctcttggacctctgtttattgatgat
gttgaagacgagacttgcttttcaaacatgagcttgtatgatgagagagaaactgaaaat
cgacttgcactatgggaggactatgaactaagaggatttttgccactgcttccagctcag
actattctcgacttctcacggaaacattcctttggaactgaaggtcccaaggaaaagaaa
gctcgtataaagaggatcctagcagcaggaaaagctttgaccagtgtgatcaaagttgat
caaaatcatgtgtattatgattctaagaagaagaagtttcttgttggtgtaaaaccgtca
gatgacttgctggattctcattcaagcccacctaaagctgatgctttgcaagataaccaa
gtaatggtgaagcataactcaccagtgatgcagcaagatcaacagatttgtatgggtgag
gaggatgatgatgaagtaattgttttcaagcctctagttactgaaaagaggaaagaggct
tctgaccaaatatatgtttctaatggaggctttaggaaacctgatcaagttgccactacg
gagaacttaaaacctttgagtggtgtggattcagcttttcatgaaaatcaatttctgcaa
gctagaggtaatgcgagtattcaagtgcctgcatctattggttccaaccttttgggactc
cttcaggcgtcaacccagtctcaggcttcgcatttgcaacaagttcagacacaggcagtg
aatcctcagtcagcccaatccttagctgctgcacgacttcagccaattcaatcacaggtc
gcacaacttcaaccactgccatcacgggttgtgcactttcaacaaactcaagctccgctt
tcacatgtttcattggtccagtcacaatctgcttctcttggtggtggtaccaagtggtta
ccagaagaagctgcttctcttgctagtagccaatctagttttgctcagatgggtaatggt
catgtgatgagaaatgagatacaaggaaatcatggggtttcctatcaccctgcacactca
ttaccggtctaccagtcctacaatgtcaatggtatgggtggtatgccatctcagtcacga
acttctgaagctgtgtttccacccaaaagtgatactgtttcgtcatctggagttattgct
gatggtctgggcgtccaatcttcaatagcaagaaaaaatccaatcagtagagcctttagg
catcttggccctccgcctgggtttaacactgtcccctctaagctgcagaaggagccagta
cctggttctgacttgtctggcaacaatctagcggttgatgattacagatggttggatgga
tacgaaactcaatcttctcgaggcgctggactcaacagttctttgaattatgcttctaaa
tcggaacaaatgggtaccagcaatggaatgaacggggctgctaatttcccgttccctggg
aaacaaattccaacatcacaggtccaagcagatcttccttattttcagaaccctcagaaa
gacagctttgtgaaccaaaatcatcaatcagcccaactccctgagcaatatcaaggacag
tcgacttggtcgagtcgtcactttgtgtga

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