Camelina sativa (false flax): 109124613
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Entry
109124613 CDS
T05044
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER
KO
K21444
poly(rC)-binding protein 3/4
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
109124613
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
109124613
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
109124613
NCBI-ProteinID:
XP_010433565
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Position
10:complement(7058539..7061071)
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AA seq
495 aa
AA seq
DB search
MAAVADSVDNNGAINLPENEIIMPAGISATTLLDENASGFPELNQPNSLAVTETTAPDTN
DSAEERWPGWPGECVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPLTTPDRI
VLISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQTAGSAFSSVRLLVASTQAINL
IGKQGSMIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRK
FLVDHTVVPLFEKQYLARVSQTRQEEPLADNKSSLHNISSNVMEPDFSLLARREPSFLER
ESRMESRVQPSGVSMYSQDPVLSARHSPGLARVSAAFVTQVSQTMQIPFSYAEDIIGVEG
ANIAYIRRRSGATITIQESPHPDQITVEIKGTSSQVQTAEQLVQEFISNHKEPVSVSGGY
GRIDTGYVPAYPPQLGNRQEPLSSSYLGTEPVQYRPTAYSQLAGLSTYTPSLSGQTYSTE
YRPASDIGGYSNYNL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgtcgcagattccgtcgacaacaacggtgctataaacctccctgagaatgaa
atcattatgccggctggaatcagtgccaccacattgcttgacgaaaacgcaagcggcttc
cctgaattgaaccagccaaatagcttagctgttaccgagactactgctcccgatacgaac
gattccgcggaggagagatggccaggttggcctggcgaatgcgtgttccgtatgatcgtt
ccggtgactaaagttggagctatcattggacgcaaaggtgactttatcaagaagatgtgt
gaggagactcgtgctcgtatcaaagtccttgatggtcctcttaccactcccgatcgcatc
gtgttaatatctggtaaggaagagccagaggcatacatgtcccctgcaatggatgcagtc
ttgagggtgtttagacgagtttcagggttacctgataatgatgatgatgatgttcaaacc
gctgggagtgccttctcttccgtgcgtttgttagttgcatctactcaggcgattaattta
attggcaaacaaggatctatgattaaatccattgttgagaactctggtgcatctgttcgt
attttatctgaagaggaaacaccgttttatgctgcgcaagatgagaggatagtggatttg
cagggtgaagctttgaaaatccttaaagcattagaagccattgttggacacctaaggaaa
tttctagtcgaccatactgttgttcctctcttcgaaaagcaatatctagctagagtctct
caaactcgtcaggaagagccgttagctgacaacaagtcatctctgcataatatttcttca
aatgtaatggagcctgatttctccctcttagcacggagggaaccttcgttcctggagcgc
gagtctcgaatggagtcacgtgttcagccttcgggagtttctatgtacagtcaggatcct
gtattgtccgccagacactctcctggtcttgctcgggtttctgctgcttttgtcacacag
gtatctcaaacgatgcaaataccattctcctatgcggaggatataattggtgtagaagga
gctaatatagcctacatccgtcgaagaagcggagctaccataaccattcaagagagtcca
catcctgatcaaatcacagtggaaatcaaaggcacatcctcccaagtacaaactgctgag
caactagttcaagagttcatcagcaatcacaaggaaccagtttcggtttcagggggatat
ggcagaatcgacactggctatgtacctgcatatcctcctcagctgggcaaccgtcaagag
ccactctccagtagctacctgggcacagagccggtgcaatacagaccaacagcatactct
cagctggcaggtctttcaacttacacgccgtctctctctggccaaacttatagtacggaa
tatagaccagcttctgatattggtggctacagcaattataatctttga
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